ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Advance Search
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
 
 help

Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d3md1a_ d.58.7.0 83 see topology u'Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1' Saccharomyces cerevisiae
ASTRAL-1.75B d3mdda2 e.6.1.1 231 see topology u'Medium-chain specific acyl-CoA dehydrogenase, mitochondrial' Sus scrofa
ASTRAL-1.75B d3mdfa_ d.58.7.1 83 see topology u'Peptidyl-prolyl cis-trans isomerase E' Homo sapiens
ASTRAL-1.75B d3meza_ b.78.1.0 111 see topology u'Mannose-specific lectin 3' Crocus vernus
ASTRAL-1.75B d3mezb_ b.78.1.0 113 see topology u'Mannose-specific lectin 3' Crocus vernus
ASTRAL-1.75B d3mfqa_ c.92.2.0 278 see topology u'High-affinity zinc uptake system protein znuA' Streptococcus suis
ASTRAL-1.75B d3mh9a_ b.125.1.0 205 see topology u'Lipoarabinomannan carrier protein LprG' Mycobacterium tuberculosis
ASTRAL-1.75B d3mhwu_ b.47.1.2 228 see topology u'Urokinase-type plasminogen activator' Homo sapiens
ASTRAL-1.75B d3mi01_ d.153.1.4 215 see topology u'Proteasome subunit alpha' Mycobacterium tuberculosis
ASTRAL-1.75B d3mi02_ d.153.1.4 223 see topology u'Proteasome subunit beta' Mycobacterium tuberculosis
ASTRAL-1.75B d3mita_ b.77.3.0 138 see topology u'Lectin' Musa acuminata
ASTRAL-1.75B d3mj0a_ b.34.14.1 118 see topology u'Protein argonaute-2' Drosophila melanogaster
ASTRAL-1.75B d3mjoa_ a.25.1.2 296 see topology u'Ribonucleoside-diphosphate reductase subunit beta' Corynebacterium ammoniagenes
ASTRAL-1.75B d3mjza_ d.80.1.0 131 see topology u'FG41 Malonate Semialdehyde Decarboxylase' coryneform bacterium
ASTRAL-1.75B d3mk1a_ c.76.1.1 480 see topology u'Alkaline phosphatase, placental type' Homo sapiens
ASTRAL-1.75B d3mkbb_ a.1.1.2 133 see topology u'Hemoglobin subunit beta' Isurus oxyrinchus
ASTRAL-1.75B d3mkva1 b.92.1.9 103 see topology u'Amidohydrolase' unidentified
ASTRAL-1.75B d3mkva2 c.1.9.18 310 see topology u'Amidohydrolase' unidentified
ASTRAL-1.75B d3mlaa_ c.26.1.3 188 see topology u'Probable nicotinate-nucleotide adenylyltransferase' Bacillus anthracis
ASTRAL-1.75B d3mmca1 d.58.1.5 66 see topology u'Sulfite reductase, dissimilatory-type subunit alpha' Archaeoglobus fulgidus
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins