ProLego Protein as lego blocks ...
 
Protein Information
PDBId & Chain1IKN : D
MoleculeNF-kappa-B inhibitor alpha
Residues216
Sequence
SSE Sequence*(10) HHHHHHHHHH
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Hp.Ha.0.Ha.0.Ha.0.Ha.Hp-0.Hp.Hp.Hp.Hp.Hp.Hp.Ha-0.Ha.0.Ha.0.0.0-0.0.0.0.0.0-0.0.0.0.0-0.0.0.0-0.0.0-0.0-0

Prefence of topology : False

Linear Topology Graph : 1IKN_D
shapeImage
Protein Id: 1IKN_D
Topology Graph : 1IKN_D
shapeImage
Protein Id: 1IKN_D
Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 HHH Hp.Ha-0 False 3ZRX:A, 3ZRX:B,
3 HHH Ha.0-Hp False 4YVQ:A, 5B1A:H, 5B1A:U, 5WGB:B, d3ag3h_, 1se7A00, 1v54H00,
3 HHH 0.Ha-Hp False 3RET:A, 3RET:B, 3RMI:A, 4RNG:D, 5VHT:A, 5VHT:B, 1ECM:A, 2WT7:B, d1ecma_, d1ybza1, d3reta_, 1ecmA00,
3 HHH Ha.Hp-Ha False 3OGI:D, 1M5I:A, d1dv5a_, d1e7la1, 1dv5A00, 1e52A00, 1m5iA00,
4 HHHH Ha.0.Ha-Hp.Hp-Ha True 4M70:A, 4M70:H, 4M70:I, 4M70:L, 4M70:Q,
4 HHHH Ha.0.Ha-Hp.Hp-0 False 3HPH:F,
4 HHHH 0.Ha.Hp-Hp.Ha-0 False d2e9xb1,
6 HHHHHH Ha.0.Ha.0.Ha-Hp.Hp.Hp.Hp-Ha.0.Ha-0.0-0 False 2XEN:A, 2ZGD:A,
7 HHHHHHH Ha.0.Ha.0.Ha.0-Hp.Hp.Hp.Hp.Hp-Ha.0.Ha.0-0.0.0-0.0-0 False
8 HHHHHHHH Ha.0.Ha.0.Ha.0.Ha-Hp.Hp.Hp.Hp.Hp.Hp-Ha.0.Ha.0.0-0.0.0.0-0.0.0-0.0-0 False 3HG0:D, 3ZUV:B,
Protein In ProLegoDB with identical/similar Topology