ProLego Protein as lego blocks ...
 

Topology view of query protein [ProLego results]

Protein Information
PDBId & Chain5TQB : B
MoleculePutative uncharacterized protein
Residues331
Sequence
SSE Sequence*(16) HHHHHHHHHHHHHHHH
* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Ha.Ha.Ha.0.0.Ha.Ha.Ha.Ha.Ha.Ha.Ha.Ha.Ha.Ha-Hp.Hp.Hr.Ha.0.Hp.0.Hp.0.Hp.Hp.Hp.Hp.Hp-0.0.Hp.Hr.0.0.0.0.0.0.0.0.0-0.0.0.0.0.0.0.0.0.0.0.0-0.0.0.0.0.0.0.0.0.0.0-0.0.0.0.0.0.0.0.0.0-0.0.0.0.0.0.0.0.0-0.0.0.0.0.0.0.0-0.0.0.0.0.0.0-0.0.0.0.0.0-0.0.0.0.0-0.0.0.0-0.0.0-0.0-0

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 5TQB_B
shapeImage
Protein Id: 5TQB_B

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 5TQB_B
shapeImage
Protein Id: 5TQB_B

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 HHH Ha.Ha-Hp True 2WY8:Q, 2XF7:A, 2XF7:B, 2XF7:C, 2XF7:D, 2XF7:E, 2XF7:F, 2XVT:A, 2XVT:B, 2XVT:C, 2XVT:D, 2XVT:E, 2XVT:F, 3A8Y:C, 3A8Y:D, 3BBZ:A, 3BBZ:B, 3EAB:A, 3EAB:B, 3EAB:C, 3EAB:D, 3EAB:E, 3EAB:F, 3GI7:A, 3GI7:B, 3GN4:A, 3L8R:A, 3L8R:B, 3L8R:C, 3L8R:D, 3L8R:E, 3L8R:F, 3L8R:G, 3L8R:H, 3LOF:A, 3LOF:B, 3LOF:C, 3LOF:D, 3LOF:E, 3LOF:F, 3MQ1:A, 3MQ1:B, 3MQ1:C, 3MQ1:D, 3MQ1:E, 3MQ1:F, 3MXZ:A, 3MZW:B, 3OVU:A, 3PH0:C, 3PH0:D, 3RGU:A, 3RGU:B, 3RGU:C, 3RGU:D, 3T47:A, 3UUL:A, 3UUL:B, 3UUN:A, 3UUN:B, 3ZE3:B, 3ZE3:C, 3ZE3:F, 4A5X:A, 4A5X:B, 4CC9:B, 4CQI:A, 4FM3:A, 4FM3:B, 4FM3:C, 4FM3:D, 4FZP:A, 4FZP:B, 4H10:A, 4HKZ:H, 4HWC:A, 4HWC:B, 4HWC:C, 4HWC:D, 4HWC:E, 4HWC:F, 4HWD:A, 4HWD:B, 4HWD:D, 4HWH:A, 4HWH:B, 4HWH:C, 4HWH:D, 4HWH:E, 4K12:B, 4KBQ:C, 4KBQ:D, 4MBQ:A, 4MBQ:B, 4MBQ:C, 4MBQ:D, 4MBQ:E, 4MBQ:F, 4NPD:A, 4NTW:C, 4PS2:A, 4TX5:A, 4TX5:B, 4U7I:A, 4U7Y:A, 4UI1:C, 4UI1:D, 4Z8L:E, 4ZNC:A, 4ZNC:B, 4ZNC:C, 5DJT:B, 5FVK:A, 5FVK:B, 5JSN:B, 5JSN:D, 5LB7:B, 1EZ3:A, 1LJ2:A, 1LP1:A, 1WRD:A, 1Z8U:A, 2C5K:T, 2E2A:A, 2ERL:A, 2FCW:A, 2FZT:A, 2GOM:A, 2J5Y:A, 2NOJ:B, 2V6Y:A, 2W2U:A, 3LF9:A, 3LG7:A, 3LHP:S, 3QWO:C, 3S1K:A, 4IOI:H, 4L8I:A, 4OYD:B, 5DJU:B, 5EFW:B, 5GNA:A, 5J0L:A, 5JSB:B, d1chua1, d1cuna2, d1ez3a_, d1fpoa2, d1g73a_, d1gpja1, d1gvna_, d1hcia4, d1hf8a1, d1iura_, d1lvfa_, d1m62a_, d1nrea_, d1nu9c1, d1o3xa_, d1o7d.1, d1qsda_, d1r4ga_, d1s35a1, d1s35a2, d1u5pa1, d1u5pa2, d1uura1, d1vcta1, d1wfda_, d1wrda1, d1x4oa1, d1x4pa1, d1x9ba_, d1xvha2, d1z8ua_, d2cpta1, d2crba1, d2e2aa_, d2erla_, d2fcwa1, d2fzta1, d2goma1, d2j5ya_, d2pmra1, d2qalt1, d2uubt1, d3bvua1, d3l8ra_, d3ldqb_, d3qwoc_, 1deeG00, 1deeG00, 1ez3A00, 1g73A00, 1gvnC00, 1hciA04, 1lj2A00, 1lp1B00, 1lreA00, 1lvfB00, 1m62A00, 1o3xA00, 1qsdA00, 1r73A00, 1t6oA00, 1wfdA00, 1x9bA00, 2e2aA00, 2erlA00, 2vqeT00,
3 HHH Ha.0-Hr False 2XTC:A, 2XTC:B, 2XZ2:A, 3M8A:B, 3M8A:C, 3M8A:E, 3M8A:H, 3M8A:J, 3M8A:L, 4IHF:J, 4NKJ:A,
3 HHH 0.0-Ha True 3MKO:A, 4BJS:D, 4FL4:A, 4FL4:D, 4FL4:G, 4JO7:A, 4JO7:C, 4QXB:B, 4UYP:B, 4UYP:D, 5ABV:B, 5ABV:D, 5ABV:F, 5ABV:H, 5LXV:B, 5LXV:D, 2CCL:B, 5M2O:B, d1jm7a_, d2cclb1, 1jm7A00,
3 HHH 0.Ha-0 True 3FXD:B, 3HLS:A, 3HLS:B, 3MTU:A, 3MTU:B, 3MTU:C, 3MTU:D, 3PH0:A, 3S6P:G, 4HP3:C, 4LN0:C, 4M70:R, 4UG3:C, 1LWU:A, 1M93:A, 2DB7:A, 2NR5:A, 2P58:A, d1iiea_, d2db7a1, d2nr5a1, 1iieA00,
3 HHH Ha.Ha-0 True 3RKO:A, 3RKO:E, 3RKO:G, 3RKO:K, 3SHG:B, 3THF:A, 3THF:B, 3U0C:A, 3U0C:B, 3ZE3:E, 4ADZ:A, 4ADZ:B, 4RP3:A, 4RP3:B, 4XA3:A, 5EU0:B, 5FMN:A, 5FMN:B, 5LCY:A, 5LCY:B, 5LCY:C, 5LCY:D, 5LSI:D, 5SZH:A, 5SZJ:B, 1UPT:B, 2HH7:A, 2P64:A, d1t50a_, d1uptb_, d2vv5a3, 1t50A00, 1uptF00,
4 HHHH Ha.Ha.Ha-Hp.Hp-0 True 3N1E:B, 3PCV:A, 3PLT:A, 3PLT:B, 3PLT:C, 4EXT:A, 4IP8:A, 4IP8:B, 4IP8:C, 4IP8:D, 4NTF:A, d1eo0a_, d2b5dx1, d2uuia1, 1eo0A00,
4 HHHH Ha.Ha.0-Hp.Hr-0 False 2XRH:A,
4 HHHH 0.Ha.Ha-0.Hp-0 True 3LBX:A, 3TUL:B, 3TUL:C, 4MYY:A, 4RKU:L, 1A32:A, 1K04:A, d1a32a_, d1k04a_, 1a32A00, 1a32A00,
4 HHHH Ha.Ha.Ha-0.Hp-0 True 1HXI:A, 4JW2:A, d1hxia_, d1k1xa1, 1hxiA00,
5 HHHHH Ha.Ha.Ha.Ha-Hp.0.Hp-0.0-0 True 3BEE:A, 3BEE:B, 3EDU:A, 3MA5:A, 3MA5:B, 3MA5:C, 3PDY:A, 3PDY:B, 1CUN:A, 1NA3:A, 1S35:A, 1U5P:A, 2VKJ:A,
5 HHHHH Ha.Ha.Ha.Ha-Hp.Hp.Hp-0.0-0 True 5B1A:E, 5B1A:R, d1oxja2, d2v5fa_, d3ag3e_, 1v54E00,
6 HHHHHH Ha.Ha.Ha.Ha.Ha-Hp.0.Hp.0-0.0.0-0.0-0 False 4J8E:A, 4J8E:B, 3KD7:A, 5FZS:A,
6 HHHHHH Ha.Ha.Ha.Ha.Ha-0.Hp.0.Hp-0.0.0-0.0-0 False 3O48:A,
7 HHHHHHH 0.Ha.Ha.Ha.Ha.Ha-0.Hp.0.Hp.0-0.0.0.0-0.0.0-0.0-0 False
7 HHHHHHH Ha.Ha.Ha.Ha.Ha.Ha-Hp.0.Hp.0.Hp-0.0.0.0-0.0.0-0.0-0 True 2XCB:A, 2XCB:B, 2XEV:C, 3FFL:A, 3FFL:B, 3FFL:C, 3FFL:D, 3Q4A:B, 3SZ7:A, 3UPV:A, 4APO:A, 4APO:B, 4CGV:A, 4CGV:B, 4CGV:C, 4CGV:D, 4GCO:A, 4H7Y:A, 4H7Y:D, 4KBQ:A, 4KBQ:B, 5AN3:A, 5AN3:B, 5AN3:C, 5L0Y:B, 5L0Y:D, 5L0Y:E, 1A17:A, 1ELW:A, 2HR2:A, 2P58:C, 2UWJ:G, 2VYI:A, 3Q49:B, 5H79:C, 5HRZ:A, d1a17a_, d1elra_, d1elwa_, d1p5qa1, d2hr2a1, 1a17A00, 1elrA00, 1elwA00,
7 HHHHHHH Ha.Ha.Ha.Ha.Ha.Ha-Hp.0.Hp.Hp.Hp-0.0.0.0-0.0.0-0.0-0 True 2XEV:A, 2XEV:B, 4GCN:A, 4GCN:B, 5L0Y:A, 5L0Y:C, 5L0Y:F, 5L0Y:G, 5L0Y:H,
8 HHHHHHHH 0.Ha.Ha.Ha.Ha.Ha.Ha-0.Hp.0.Hp.0.Hp-0.0.0.0.0-0.0.0.0-0.0.0-0.0-0 False 3GYZ:A,
8 HHHHHHHH Ha.Ha.Ha.Ha.Ha.Ha.Ha-Hp.0.Hp.Hp.Hp.Hp-0.0.0.0.0-0.0.0.0-0.0.0-0.0-0 False 3RO3:A,
Protein In ProLegoDB with identical/similar Topology