ProLego Protein as lego blocks ...
 

Topology view of query protein [ProLego results]

Protein Information
PDBId & Chain4Y5Z : I
MoleculeCoat protein
Residues192
Sequence
SSE Sequence*(15) EEHHEEHEHEEHHEE
* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Ea.Cp.Ha.Ca.Ea.Ca.0.0.0.0.0.Hr.0.Ea-Ca.0.Cp.0.0.Ea.0.Ea.0.0.0.0.0-Cp.Ep.0.0.0.0.0.0.0.0.0.0-Ep.0.0.0.Ca.Ep.0.0.0.0.0-Ep.0.0.0.Ea.0.0.0.0.0-0.0.0.0.Ea.0.0.0.Cp-0.0.0.0.0.0.Ca.0-Ca.0.0.0.0.Ep.0-0.0.0.0.0.Ep-0.0.0.0.Ea-0.0.0.Ca-0.Ea.Cp-Ep.0-Ea

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 4Y5Z_I
shapeImage
Protein Id: 4Y5Z_I

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 4Y5Z_I
shapeImage
Protein Id: 4Y5Z_I

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 EEH Ea.Cp-Ca False 4MIT:E, 4MIT:F, 4MIT:G, 4MIT:H, 1BRB:I, d1iyma_, 1iymA00,
3 HEE Ca.Ea-0 False 3K65:A, d1dwka2, d1h5oa_, 1h5oA00,
3 EEH Ea.Ca-0 True 3OW2:T, 1VQO:U, 2PUY:A, d1vq8u1, d1we9a_, d1wjva1, d2puya_, 1vq8U00,
3 EHE Ca.0-Ea False d1sddb1, d1ugla_, d1y7ma2, 1uglA00,
3 EHE 0.0-Ea True 3S2R:A, 3S2R:B, 4EZF:A, 4EZF:B, 4OOA:A, 4OOA:B, 4OOA:C, 4OOA:D, 4OOA:E, 4OOA:F, 4R10:B, d1clvi_, d1k91a_, 2o9uX00,
3 EHH 0.Hr-0 False 3V9R:B, 3VIQ:B, 4F9K:A, 4GHJ:B, 4HDD:A, 4TSH:A, 4Z8E:A, 4Z8E:B, 4Z8E:C, 5LUT:C, 5LUT:E, 1NGM:B, 4YC5:A, 4ZN8:A, 5VC9:C, 5X42:B, d1kbha_, d1p94a_, 1kbhA00, 1ngmB00, 1ngmJ00, 1p94A00,
3 HHE Hr.0-0 True 2ZXX:D, 2ZXX:E, 3H87:D, 3KXE:C, 3KXE:D, 3PN7:D, 4FXE:A, 4FXE:B, 4J2N:B, 4J2N:D, 4QIC:B, 4QIC:D, 4Z8L:C, 5CEG:A, 5CEG:C, 1HWT:C, 1OV9:A, 1T0F:C, 1ZX3:A, 2BSQ:E, 2ER8:A, 5VJI:C, 5WWO:C, 5X3T:A, d1ov9a_, d1y9ba1, d2bska1, d2bsqe1, 1bpeA01, 1bpeA01, 1uklC00,
3 HEE 0.Ea-0 True 2Y8T:B, 2Y8T:E, 2ZJR:Z, 3H31:A, 3O27:B, 3SF4:D, 3SF4:E, 3SF4:F, 4I6M:D, 4XO1:A, 4YIZ:B, 4YIZ:D, 4YIZ:F, 5DM6:Z, 5ITM:A, 5ITM:B, 5ITM:C, 5ITM:D, 5ITM:E, 5ITM:F, 1AVY:A, 1HLQ:A, 1ICF:I, 1ISU:A, 1PML:A, 2ATC:B, 2DLB:A, 2GGV:A, d1hlqa_, d1icfi_, d1isua_, d1ppji_, d1rwsa_, d1skza1, d1tdha3, d1yfba1, d2dlba1, d2i9aa2, d2qam01, d2zdra1, d3h31a_, 1avyA00, 1avyB00, 1avyA00, 1avyB00, 1hlqA00, 1icfI00, 1ppjI00, 1rwsA00, 2fd6A02,
4 EHEE 0.0.0-Ea.0-0 True 3D2Q:B, 3IFQ:C, 3IFQ:D, d2j01x1,
4 EEHH 0.0.Hr-0.0-0 True 4OM3:B, 4UZZ:A, 5TW1:T, 2OA5:A, d2oa5a_, 1j1eF00,
4 EHHE 0.Hr.0-0.0-0 True 3ERM:D, 3WU2:E, 4IL6:E, 5B66:E, 5H2F:E, 5TIS:E, d3arce_,
4 HHEE Hr.0.Ea-0.0-0 False 1NL1:A,
5 EHEEH 0.0.0.0-Ea.0.0-0.0-0 False 3D2Q:A, 3D2Q:C,
5 EEHHE 0.0.Hr.0-0.0.0-0.0-0 False 4N0H:F, d2bw3a1,
Protein In ProLegoDB with identical/similar Topology