ProLego Protein as lego blocks ...
 
Protein Information
PDBId & Chain4NEF : B
MoleculeAquaporin-2
Residues233
Sequence
SSE Sequence*(10) HHHHHHHHHH
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Ha.0.Ha.0.0.Ha.0.Ha.0-0.0.0.0.0.0.0.0-Hp.0.Hr.0.0.Hp.0-0.0.0.Hp.0.0-0.Ha.Ha.0.0-0.0.Hp.0-Hr.0.0-0.0-0

Prefence of topology : False

Linear Topology Graph : 4NEF_B
shapeImage
Protein Id: 4NEF_B
Topology Graph : 4NEF_B
shapeImage
Protein Id: 4NEF_B
Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 HHH Ha.0-0 False 3BPJ:A, 3BPJ:B, 3BPJ:C, 3BPJ:D, 3MTU:E, 3MTU:F, 4CLQ:B, 4HFX:A, 4IAO:C, 4IAO:D, 4OM3:A, 4X86:A, 4YTW:A, 4YTW:C, 5FD9:A, 1YKH:B, 2B9C:A, d1ykhb1, d2bskb1,
3 HHH 0.Ha-0 True 3FXD:B, 3HLS:A, 3HLS:B, 3MTU:A, 3MTU:B, 3MTU:C, 3MTU:D, 3PH0:A, 3S6P:G, 4HP3:C, 4LN0:C, 4M70:R, 4UG3:C, 1LWU:A, 1M93:A, 2DB7:A, 2NR5:A, 2P58:A, d1iiea_, d2db7a1, d2nr5a1, 1iieA00,
4 HHHH 0.Ha.0-0.0-0 True 3ERM:A, 3ERM:C, 4AFL:F, 4HFX:B, 5X1E:C, d1fs1b1,
4 HHHH Ha.0.0-0.0-Hr True 3EJB:A, 3EJB:C, 3EJB:E, 3EJB:G, 4IHF:H, 4IHF:L,
4 HHHH 0.0.Ha-0.0-0 False 4H9D:C, 5JVP:D, 2OTA:A, d2otaa1,
9 HHHHHHHHH Ha.0.Ha.0.0.Ha.0.Ha-0.0.0.0.0.0.0-Hp.0.Hr.0.0.Hp-0.0.0.Hp.0-0.Ha.Ha.0-0.0.Hp-Hr.0-0 False 3GD8:A,
Protein In ProLegoDB with identical/similar Topology