Protein Detail

Protein Information

PDBId & Chain	4C2M : Y
Molecule	DNA-directed RNA polymerases I, II, and III subunit RPABC5
Residues	69
Sequence
SSE Sequence^*(4)	`HHHH`

^* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]

Protein Topology

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand] `Hr.Hr.0-Hr.0-0`

Prefence of topology : True

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 4C2M_Y

Protein Id: 4C2M_Y

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 4C2M_Y

Protein Id: 4C2M_Y

Expand

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology

#SSE	SSE string	Contact String	Preferrence	ProteinDB	DomainsDB
3	HHH	Hr.Hr-Hr	True	2XVC:A, 3C57:B, 3E7L:A, 3E7L:C, 3E7L:D, 3FGH:A, 3I71:A, 3SJM:A, 3SJM:B, 3U2B:C, 4A3N:A, 4D6K:A, 4D6K:B, 4D6K:C, 4D6K:D, 4D6K:E, 4L5E:A, 4QR9:A, 4QR9:B, 4S2Q:D, 4X86:B, 4Y60:C, 5DUK:A, 5DUK:B, 5TW1:E, 1GUU:A, 1GVD:A, 1L0O:C, 1UJ8:A, 2CJJ:A, 2HDZ:A, 2OOA:A,	d1a6qa1, d1efub3, d1fexa_, d1g2ha_, d1gv2a2, d1gvda_, d1hlva2, d1iioa_, d1irza_, d1iufa2, d1j3da_, d1k78a2, d1l0oc_, d1l6ja1, d1lbua1, d1m1eb_, d1ofcx1, d1qzea1, d1rp3a1, d1rq6a_, d1smyf1, d1ttea1, d1u78a2, d1uj8a1, d1uxca_, d1uzca_, d1veka_, d1w0ua_, d1wgxa_, d1wiva_, d1x58a1, d1xb2b1, d1xc5a1, d2cfxa1, d2cg4a1, d2cjja1, d2cosa1, d2cp8a1, d2cqra1, d2crga1, d2crna1, d2cyya1, d2daha1, d2diia1, d2dkla1, d2doda1, d2hdza_, d2lefa_, d2ve8a_, d4a3na_, 1bbyA00, 1bbyA00, 1dp3A00, 1efuB01, 1fexA00, 1g2hA00, 1gt0D00, 1gvdA00, 1hsmA00, 1ifyA00, 1iioA00, 1irzA00, 1iv6A00, 1k78I00, 1l0oC00, 1l8yA00, 1rq6A00, 1uxdA00, 1uzcA00, 1w0tA00, 1w0uA00, 1wivA00, 2lefA00,
3	HHH	Hr.0-0	True	2ZXX:D, 2ZXX:E, 3H87:D, 3KXE:C, 3KXE:D, 3PN7:D, 4FXE:A, 4FXE:B, 4J2N:B, 4J2N:D, 4QIC:B, 4QIC:D, 4Z8L:C, 5CEG:A, 5CEG:C, 1HWT:C, 1OV9:A, 1T0F:C, 1ZX3:A, 2BSQ:E, 2ER8:A, 5VJI:C, 5WWO:C, 5X3T:A,	d1ov9a_, d1y9ba1, d2bska1, d2bsqe1, 1bpeA01, 1bpeA01, 1uklC00,

Protein In ProLegoDB with identical/similar Topology

Proteins with Identical Topology

[Same secondary structure composition, contact-pair and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
4C2M	J	69	DNA-directed RNA polymerases I, II, and III subunit RPABC5	View
4F2L	A	59	5'-AMP-activated protein kinase catalytic subunit alpha-1	View
1OR7	C	66	Anti-sigma-E factor RseA	View
1TWF	J	65	DNA-directed RNA polymerases I, II, and III subunit RPABC5	View
d1or7c_	--	66	u'Anti-sigma-E factor RseA'	View
d1qpza1	--	57	u'HTH-type transcriptional repressor PurR'	View
d1twfj_	--	65	u'DNA-directed RNA polymerases I, II, and III subunit RPABC5'	View
1efaA01	--	59	Lactose operon repressor	View
1twfJ00	--	65	DNA-directed RNA polymerases I, II, and III subunit RPABC5	View

Protein with similar Topology [same scaffold]

[Same secondary structure composition and contact-pair but of different orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
3GN4	E	117	Unconventional myosin-VI	View
3OUF	A	93	Potassium channel protein	View
3OUF	B	96	Potassium channel protein	View
3UB0	C	82	Replicase polyprotein 1ab	View
4NQW	B	73	Anti-sigma-K factor RskA	View
4XRM	A	59	Homeobox protein Meis2	View
4XRM	B	64	Homeobox protein Meis2	View
5F22	A	79	Replicase polyprotein 1a	View
5WUR	C	70	Anti-sigma-W factor RsiW	View
5WUR	D	69	Anti-sigma-W factor RsiW	View

Proteins with topologies of same secondary structure (H/E) component

[Topologies with same secondary structure composition with different contact-pairs and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
2XRH	A	100	Uncharacterized protein	View
2Y39	A	110	Nickel and cobalt resistance protein CnrR	View
2YK3	A	109	Cytochrome c	View
2YK3	B	109	Cytochrome c	View
2YK3	C	109	Cytochrome c	View
2ZC2	B	74	Uncharacterized protein	View
2ZRR	A	83	Mundticin KS immunity protein	View
3A1G	A	69	RNA-directed RNA polymerase catalytic subunit	View
3A1G	C	69	RNA-directed RNA polymerase catalytic subunit	View
3A1Y	A	58	50S ribosomal protein L12	View
3A1Y	B	58	50S ribosomal protein L12	View
3A1Y	C	58	50S ribosomal protein L12	View
3A1Y	D	58	50S ribosomal protein L12	View
3A1Y	E	58	50S ribosomal protein L12	View
3A1Y	F	58	50S ribosomal protein L12	View
3A5T	B	90	Transcription factor MafG	View
3A9F	A	78	Cytochrome c	View
3A9F	B	77	Cytochrome c	View
3AAI	A	75	Copper homeostasis operon regulatory protein	View
3AAI	C	74	Copper homeostasis operon regulatory protein	View
3AJI	B	73	26S protease regulatory subunit 6B	View
3AJI	D	73	26S protease regulatory subunit 6B	View
3AX2	A	70	Mitochondrial import receptor subunit TOM20 homolog	View
3AX2	C	70	Mitochondrial import receptor subunit TOM20 homolog	View
3AX2	E	65	Mitochondrial import receptor subunit TOM20 homolog	View
3AX2	G	66	Mitochondrial import receptor subunit TOM20 homolog	View
3B09	A	62	Peptidyl-prolyl cis-trans isomerase	View
3B0B	A	97	Centromere protein S	View
3B0B	B	96	Centromere protein S	View
3B0B	C	74	Centromere protein X	View
3B0B	D	74	Centromere protein X	View
3BEY	A	88	Conserved protein	View
3BEY	B	88	Conserved protein	View
3BEY	E	86	Conserved protein	View
3BQP	A	80	Prosaposin	View
3BQP	B	80	Prosaposin	View
3BS3	A	58	Putative DNA-binding protein	View
3CE7	A	90	Acyl carrier protein	View
3CTW	B	120	Uncharacterized protein	View
3CTW	D	119	Uncharacterized protein	View
3CU4	A	79	Lipoprotein cytochrome c, 1 heme-binding site	View
3CX5	W	107	Cytochrome c iso-1	View
3D0W	A	85	Uncharacterized protein YflH	View
3D0W	B	85	Uncharacterized protein YflH	View
3D0W	C	83	Uncharacterized protein YflH	View
3D0W	D	84	Uncharacterized protein YflH	View
3D1N	J	83	POU domain, class 6, transcription factor 1	View
3D1N	N	82	POU domain, class 6, transcription factor 1	View
3D1N	P	79	POU domain, class 6, transcription factor 1	View
3EJB	A	78	Acyl carrier protein	View
3EJB	C	77	Acyl carrier protein	View
3EJB	E	78	Acyl carrier protein	View
3EJB	G	77	Acyl carrier protein	View
3EPY	A	88	Acyl-CoA-binding domain-containing protein 7	View
3EPY	B	86	Acyl-CoA-binding domain-containing protein 7	View
3ERM	A	65	Uncharacterized protein	View
3ERM	B	62	Uncharacterized protein	View
3ERM	C	62	Uncharacterized protein	View
3ERM	D	63	Uncharacterized protein	View
3ERM	E	56	Uncharacterized protein	View
3EVY	A	83	Putative type I restriction enzyme R protein	View
3EVY	B	84	Putative type I restriction enzyme R protein	View
3F2E	A	83	SIRV coat protein	View
3F6W	E	78	DNA-binding protein	View
3FBI	B	91	Mediator of RNA polymerase II transcription subunit 31	View
3FBI	D	93	Mediator of RNA polymerase II transcription subunit 31	View
3FBL	A	82	Uncharacterized protein ORF132	View
3FLV	A	92	Acyl-CoA-binding domain-containing protein 5	View
3FLV	B	89	Acyl-CoA-binding domain-containing protein 5	View
3G21	A	77	Gag-Pro polyprotein	View
3G36	A	51	Protein dpy-30 homolog	View
3G36	B	50	Protein dpy-30 homolog	View
3G36	C	50	Protein dpy-30 homolog	View
3G36	D	50	Protein dpy-30 homolog	View
3G80	A	73	Protein B2	View
3G80	B	73	Protein B2	View
3GZM	B	81	Acyl carrier protein	View
3H36	A	76	Polyribonucleotide nucleotidyltransferase	View
3H3M	A	87	Flagellar protein FliT	View
3H87	C	72	Antitoxin VapB2	View
3HFH	A	134	Transcription elongation regulator 1	View
3HGL	A	74	Effector protein HopAB2	View
3HHW	A	71	Phosphoprotein	View
3HHW	C	71	Phosphoprotein	View
3HHW	D	71	Phosphoprotein	View
3HIL	A	63	Ephrin type-A receptor 1	View
3HIL	B	62	Ephrin type-A receptor 1	View
3HLS	D	61	Guanylate cyclase soluble subunit beta-1	View
3HPH	F	60	PC4 and SFRS1-interacting protein	View
3HPH	G	54	PC4 and SFRS1-interacting protein	View
3HUG	A	80	ECF RNA polymerase sigma factor SigL	View
3HUG	C	77	ECF RNA polymerase sigma factor SigL	View
3HUG	E	73	ECF RNA polymerase sigma factor SigL	View
3HUG	F	56	Anti-sigma-L factor RslA	View
3HUG	G	74	ECF RNA polymerase sigma factor SigL	View
3HUG	I	77	ECF RNA polymerase sigma factor SigL	View
3HUG	K	71	ECF RNA polymerase sigma factor SigL	View
3HUG	M	74	ECF RNA polymerase sigma factor SigL	View
3HUG	O	73	ECF RNA polymerase sigma factor SigL	View
3HUG	Q	77	ECF RNA polymerase sigma factor SigL	View
3HUG	S	73	ECF RNA polymerase sigma factor SigL	View
3IDW	A	66	Actin cytoskeleton-regulatory complex protein SLA1	View
3IQC	A	119	Flagellar protein FliS	View
3IQC	B	101	Flagellar protein FliS	View
3JVO	A	92	Gp6	View
3JVO	C	90	Gp6	View
3JVO	D	92	Gp6	View
3JVO	G	93	Gp6	View
3JVO	H	92	Gp6	View
3JVO	I	91	Gp6	View
3JVO	L	92	Gp6	View
3JVO	M	92	Gp6	View
3KAW	A	99	Uncharacterized protein	View
3KAW	B	100	Uncharacterized protein	View
3KAW	C	101	Uncharacterized protein	View
3KAW	D	100	Uncharacterized protein	View
3KAW	E	100	Uncharacterized protein	View
3KAW	F	101	Uncharacterized protein	View
3KAW	G	100	Uncharacterized protein	View
3KAW	H	99	Uncharacterized protein	View
3KDQ	A	149	Uncharacterized protein	View
3KDQ	B	149	Uncharacterized protein	View
3KDQ	C	150	Uncharacterized protein	View
3KDQ	D	149	Uncharacterized protein	View
3KKA	A	64	Ephrin type-A receptor 1	View
3KR3	D	60	Insulin-like growth factor II	View
3KUS	B	70	Polyadenylate-binding protein 1	View
3KW6	A	70	26S protease regulatory subunit 8	View
3LBX	A	140	Spectrin alpha chain, erythrocytic 1	View
3LYS	A	102	Prophage pi2 protein 01, integrase	View
3LYS	B	101	Prophage pi2 protein 01, integrase	View
3LYS	C	101	Prophage pi2 protein 01, integrase	View
3LYS	D	104	Prophage pi2 protein 01, integrase	View
3LYS	E	101	Prophage pi2 protein 01, integrase	View
3LYS	F	102	Prophage pi2 protein 01, integrase	View
3MAB	B	88	Uncharacterized protein	View
3MAY	A	86	Uncharacterized protein	View
3MAY	F	86	Uncharacterized protein	View
3MVD	A	98	Histone H3.2	View
3MVD	D	93	Histone H2B 1.1	View
3MVD	E	95	Histone H3.2	View
3MVD	H	93	Histone H2B 1.1	View
3N1E	B	141	Vacuolar protein sorting-associated protein 54	View
3N7S	C	91	Receptor activity-modifying protein 1	View
3N7S	D	84	Receptor activity-modifying protein 1	View
3NAR	A	70	Zinc fingers and homeoboxes protein 1	View
3NAR	B	70	Zinc fingers and homeoboxes protein 1	View
3NKZ	A	93	Flagellar protein FliT	View
3NZL	A	70	DNA-binding protein SATB1	View
3O0Z	A	149	Rho-associated protein kinase 1	View
3O0Z	C	156	Rho-associated protein kinase 1	View
3OGI	B	81	Putative ESAT-6-like protein 7	View
3OMT	A	68	Uncharacterized protein	View
3OMT	B	67	Uncharacterized protein	View
3ONJ	A	97	t-SNARE VTI1	View
3OPC	A	126	Uncharacterized protein	View
3OPC	B	129	Uncharacterized protein	View
3P57	P	105	Histone acetyltransferase p300	View
3PCV	A	146	Leukotriene C4 synthase	View
3PLT	A	214	Sphingolipid long chain base-responsive protein LSP1	View
3PLT	B	207	Sphingolipid long chain base-responsive protein LSP1	View
3PLT	C	213	Sphingolipid long chain base-responsive protein LSP1	View
3Q4H	A	87	ESAT-6-like protein EsxG	View
3Q4H	C	84	ESAT-6-like protein EsxG	View
3QT2	C	110	Interleukin-5	View
3R84	B	77	Mediator of RNA polymerase II transcription subunit 22	View
3R84	D	75	Mediator of RNA polymerase II transcription subunit 22	View
3R84	F	74	Mediator of RNA polymerase II transcription subunit 22	View
3R84	H	75	Mediator of RNA polymerase II transcription subunit 22	View
3R84	J	76	Mediator of RNA polymerase II transcription subunit 22	View
3R84	L	76	Mediator of RNA polymerase II transcription subunit 22	View
3R84	N	76	Mediator of RNA polymerase II transcription subunit 22	View
3R84	P	74	Mediator of RNA polymerase II transcription subunit 22	View
3R84	R	76	Mediator of RNA polymerase II transcription subunit 22	View
3R84	T	76	Mediator of RNA polymerase II transcription subunit 22	View
3R84	V	78	Mediator of RNA polymerase II transcription subunit 22	View
3R84	X	75	Mediator of RNA polymerase II transcription subunit 22	View
3S63	A	88	Saposin-like protein	View
3S64	A	81	Saposin-like protein 1	View
3T47	B	70	Uncharacterized protein	View
3T49	A	70	Fibrinogen-binding protein	View
3T49	B	70	Fibrinogen-binding protein	View
3T49	C	69	Fibrinogen-binding protein	View
3T49	D	69	Fibrinogen-binding protein	View
3T6G	B	134	Breast cancer anti-estrogen resistance protein 1	View
3T6G	D	131	Breast cancer anti-estrogen resistance protein 1	View
3T9O	A	108	Diguanylate cyclase YdeH	View
3TEQ	C	101	Stromal interaction molecule 1	View
3TGU	F	101	Cytochrome b-c1 complex subunit 7	View
3TGU	S	101	Cytochrome b-c1 complex subunit 7	View
3THG	A	99	Ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic	View
3TJY	A	74	Effector protein hopAB3	View
3TL8	B	87	Effector protein HopAB2	View
3TL8	F	88	Effector protein HopAB2	View
3TL8	K	88	Effector protein HopAB2	View
3TL8	L	87	Effector protein HopAB2	View
3TOL	B	106	Soluble cytochrome b562	View
3TQN	A	103	Transcriptional regulator, GntR family	View
3TQN	C	97	Transcriptional regulator, GntR family	View
3TUL	B	130	Cell invasion protein SipB	View
3TUL	C	127	Cell invasion protein SipB	View
3U21	A	103	Nuclear factor related to kappa-B-binding protein	View
3U21	B	102	Nuclear factor related to kappa-B-binding protein	View
3U43	A	92	Colicin-E2 immunity protein	View
3U8V	A	83	Metal-binding protein SmbP	View
3U8V	B	83	Metal-binding protein SmbP	View
3UB0	B	82	Replicase polyprotein 1ab	View
3UB0	E	81	Replicase polyprotein 1ab	View
3UB0	F	78	Replicase polyprotein 1ab	View
3UCS	A	99	Chaperone-modulator protein CbpM	View
3UCS	C	74	Curved DNA-binding protein	View
3UCS	D	69	Curved DNA-binding protein	View
3ULQ	B	58	Transcriptional regulatory protein ComA	View
3V9R	A	86	MHF histone-fold complex subunit 1	View
3V9R	C	85	MHF histone-fold complex subunit 1	View
3VFZ	B	62	ECF RNA polymerase sigma factor SigD	View
3VRC	A	130	Cytochrome c'	View
3W8H	B	66	Serine/threonine-protein kinase 25	View
3WHJ	A	111	Probable 26S proteasome regulatory subunit p27	View
3WU2	E	79	Cytochrome b559 subunit alpha	View
3X0F	A	87	CD81 antigen	View
3X0F	B	88	CD81 antigen	View
3X1T	A	98	Histone H3.1	View
3X1T	D	93	Histone H2B type 1-A	View
3X1T	E	98	Histone H3.1	View
3X1T	H	93	Histone H2B type 1-A	View
3X38	A	78	Mitochondrial morphogenesis protein SLD7	View
3X38	B	79	Mitochondrial morphogenesis protein SLD7	View
3X38	C	79	Mitochondrial morphogenesis protein SLD7	View
3X38	D	77	Mitochondrial morphogenesis protein SLD7	View
3X39	A	82	Cytochrome c-551	View
3X39	B	82	Cytochrome c-551	View
3ZDM	A	69	Small glutamine-rich tetratricopeptide repeat-containing protein 2	View
3ZDM	D	69	Small glutamine-rich tetratricopeptide repeat-containing protein 2	View
3ZE3	A	116	Diacylglycerol kinase	View
3ZE3	D	108	Diacylglycerol kinase	View
3ZFI	A	93	Rap1a protein	View
3ZK1	D	89	ATP synthase subunit c	View
3ZK1	E	89	ATP synthase subunit c	View
3ZK1	H	89	ATP synthase subunit c	View
3ZK1	J	89	ATP synthase subunit c	View
3ZK1	L	89	ATP synthase subunit c	View
3ZK1	P	89	ATP synthase subunit c	View
3ZK1	Q	89	ATP synthase subunit c	View
3ZK1	R	89	ATP synthase subunit c	View
3ZK1	U	89	ATP synthase subunit c	View
3ZK1	V	89	ATP synthase subunit c	View
3ZR8	X	65	Avr3a11	View
4A5U	B	80		View
4A69	C	69	Nuclear receptor corepressor 2	View
4A69	D	68	Nuclear receptor corepressor 2	View
4AFL	F	87	Inhibitor of growth protein 4	View
4B0F	A	55	C4b-binding protein alpha chain	View
4B0F	F	51	C4b-binding protein alpha chain	View
4BJQ	A	78	PENICILLIN BINDING PROTEIN TRANSPEPTIDASE DOMAIN PROTEIN	View
4BJQ	B	78	PENICILLIN BINDING PROTEIN TRANSPEPTIDASE DOMAIN PROTEIN	View
4BJQ	C	78	PENICILLIN BINDING PROTEIN TRANSPEPTIDASE DOMAIN PROTEIN	View
4BJQ	F	78	PENICILLIN BINDING PROTEIN TRANSPEPTIDASE DOMAIN PROTEIN	View
4BJQ	G	77	PENICILLIN BINDING PROTEIN TRANSPEPTIDASE DOMAIN PROTEIN	View
4BJQ	H	77	PENICILLIN BINDING PROTEIN TRANSPEPTIDASE DOMAIN PROTEIN	View
4BPF	A	85	D-alanine--poly(phosphoribitol) ligase subunit 2	View
4CAY	B	92	Histone H2B type 1-J	View
4CFQ	B	84	Protein S100-A4	View
4CFQ	D	84	Protein S100-A4	View
4CQ4	A	106	Uncharacterized protein	View
4CQ4	B	102	Uncharacterized protein	View
4CQ4	C	102	Uncharacterized protein	View
4CQ4	D	102	Uncharacterized protein	View
4CSR	A	88	Nuclear transcription factor Y subunit beta	View
4CVW	C	101	Limit dextrinase inhibitor	View
4CVW	D	102	Limit dextrinase inhibitor	View
4DID	B	127	Inositol phosphate phosphatase SopB	View
4DIR	B	83	Protein S100-A5	View
4DRI	B	96	Serine/threonine-protein kinase mTOR	View
4DXE	H	74	Acyl carrier protein	View
4DXE	I	77	Acyl carrier protein	View
4DXE	J	76	Acyl carrier protein	View
4DXE	K	76	Acyl carrier protein	View
4DXE	L	76	Acyl carrier protein	View
4E45	A	102	Centromere protein S	View
4E45	C	94	Centromere protein S	View
4E45	F	102	Centromere protein S	View
4E45	H	94	Centromere protein S	View
4E45	I	74	Centromere protein X	View
4E45	K	94	Centromere protein S	View
4E45	M	93	Centromere protein S	View
4EMN	A	81	Resuscitation-promoting factor RpfB	View
4EMN	B	80	Resuscitation-promoting factor RpfB	View
4EMN	C	81	Resuscitation-promoting factor RpfB	View
4ETR	A	121	Uncharacterized protein	View
4ETR	B	122	Uncharacterized protein	View
4EXT	A	96	DNA repair protein REV1	View
4FQN	C	85	Cerebral cavernous malformations 2 protein	View
4FQN	D	77	Cerebral cavernous malformations 2 protein	View
4G6D	A	62	RNA polymerase sigma factor SigA	View
4G92	B	92	Uncharacterized protein	View
4GEH	B	65	Serine/threonine-protein kinase 26	View
4GMQ	A	92	Putative ribosome associated protein	View
4H2W	C	78	Aminoacyl carrier protein	View
4H2W	D	75	Aminoacyl carrier protein	View
4H9D	A	95	HNH endonuclease family protein	View
4H9D	C	80	HNH endonuclease family protein	View
4H9N	A	98	Histone H3.3	View
4HEO	A	53	Phosphoprotein	View
4HEO	B	57	Phosphoprotein	View
4HFK	B	98	Uncharacterized protein	View
4HFK	D	97	Uncharacterized protein	View
4HFX	B	62	Transcription elongation factor B polypeptide 3	View
4HKG	A	80	Phosphopantetheine attachment site family protein	View
4HKG	B	80	Phosphopantetheine attachment site family protein	View
4HR1	A	117	Putative uncharacterized protein	View
4I3M	A	150	Aerotaxis transducer Aer2	View
4IEJ	A	75	DNA methyltransferase 1-associated protein 1	View
4IHF	G	76		View
4IHF	H	75		View
4IHF	K	76		View
4IHF	L	72		View
4IL6	E	78	Cytochrome b559 subunit alpha	View
4IP8	A	105	Serum amyloid A-1 protein	View
4IP8	B	105	Serum amyloid A-1 protein	View
4IP8	C	105	Serum amyloid A-1 protein	View
4IP8	D	105	Serum amyloid A-1 protein	View
4IYL	A	85	30S ribosomal protein S15	View
4J2C	A	108	Syntaxin-6	View
4J2C	C	106	Syntaxin-6	View
4JCG	A	81	Cytochrome c-552	View
4JDX	A	102	Fluorescence recovery protein	View
4JDX	B	102	Fluorescence recovery protein	View
4JDX	C	102	Fluorescence recovery protein	View
4JDX	D	97	Fluorescence recovery protein	View
4JEA	A	106	Soluble cytochrome b562	View
4JEA	B	106	Soluble cytochrome b562	View
4JEA	C	106	Soluble cytochrome b562	View
4JEA	D	106	Soluble cytochrome b562	View
4JLE	A	149	Uncharacterized protein	View
4KEH	C	77		View
4KP3	C	81	RILP-like protein 2	View
4LLE	A	115	Probable two-component sensor	View
4LUP	A	91	RNA polymerase sigma factor	View
4LUP	C	94	RNA polymerase sigma factor	View
4LWS	B	86	Uncharacterized protein	View
4M1P	A	96	Uncharacterized protein	View
4M70	A	107	Rx protein	View
4M70	H	112	Rx protein	View
4M70	I	108	Rx protein	View
4M70	L	112	Rx protein	View
4M70	Q	108	Rx protein	View
4ME7	E	73	Antitoxin EndoAI	View
4ME7	F	74	Antitoxin EndoAI	View
4MHL	A	161	Interleukin-11	View
4MRT	C	77	Tyrocidine synthase 3	View
4MYY	A	79	Polyketide synthase module	View
4MYY	B	84	Polyketide synthase module	View
4N5B	A	104	Phosphoprotein	View
4N5B	B	100	Phosphoprotein	View
4N5B	C	100	Phosphoprotein	View
4N5B	D	101	Phosphoprotein	View
4N5B	E	103	Phosphoprotein	View
4N5B	F	101	Phosphoprotein	View
4N5B	G	101	Phosphoprotein	View
4N5B	H	103	Phosphoprotein	View
4NC7	A	79	DNA-directed RNA polymerase subunit delta	View
4NE3	A	91	Centromere protein S	View
4NE3	B	73	Centromere protein X	View
4NQJ	A	177	E3 ubiquitin-protein ligase TRIM69	View
4NQJ	B	176	E3 ubiquitin-protein ligase TRIM69	View
4NQJ	C	177	E3 ubiquitin-protein ligase TRIM69	View
4NTF	A	145	Leukotriene C4 synthase	View
4OM3	B	112	Transducin-like enhancer protein 1	View
4OW1	A	86	Resuscitation-promoting factor RpfC	View
4OW1	S	86	Resuscitation-promoting factor RpfC	View
4OW1	T	85	Resuscitation-promoting factor RpfC	View
4OW1	U	85	Resuscitation-promoting factor RpfC	View
4P3A	A	70	Complement C5	View
4P3A	B	69	Complement C5	View
4P3A	C	68	Complement C5	View
4P3A	D	69	Complement C5	View
4PCW	B	88	Filaggrin	View
4PCW	D	88	Filaggrin	View
4PE0	A	92	Protein S100-B	View
4PE0	X	89	Protein S100-B	View
4PH1	A	73	Gag-pro-pol polyprotein	View
4PH1	B	76	Gag-pro-pol polyprotein	View
4PH1	C	79	Gag-pro-pol polyprotein	View
4PU7	A	71	Antitoxin HipB	View
4PU7	B	64	Antitoxin HipB	View
4PXH	B	75	Peptide synthetase	View
4PXH	D	74	Peptide synthetase	View
4PXH	F	74	Peptide synthetase	View
4PZ1	A	97	Uncharacterized protein	View
4Q2U	A	83	Antitoxin DinJ	View
4Q2U	C	83	Antitoxin DinJ	View
4Q2U	E	83	Antitoxin DinJ	View
4Q2U	G	83	Antitoxin DinJ	View
4Q2U	I	83	Antitoxin DinJ	View
4Q2U	K	82	Antitoxin DinJ	View
4Q2U	M	82	Antitoxin DinJ	View
4Q2U	O	82	Antitoxin DinJ	View
4QKO	A	87	Pyocin-S2 immunity protein	View
4QKO	C	87	Pyocin-S2 immunity protein	View
4QKO	E	87	Pyocin-S2 immunity protein	View
4QKO	G	86	Pyocin-S2 immunity protein	View
4QNC	A	81	Sugar transporter SemiSWEET	View
4QNC	B	82	Sugar transporter SemiSWEET	View
4RKU	2	146	Type II chlorophyll a/b binding protein from photosystem I	View
4RKU	G	84	Photosystem I reaction center subunit V	View
4RKU	K	66	Photosystem I reaction center subunit X psaK	View
4RKU	L	163	Putative uncharacterized protein	View
4RNG	A	82	MtN3/saliva family	View
4RNG	B	82	MtN3/saliva family	View
4RNG	C	83	MtN3/saliva family	View
4RNG	E	82	MtN3/saliva family	View
4RNG	F	82	MtN3/saliva family	View
4TT0	A	129	Large tegument protein deneddylase	View
4TT0	B	131	Large tegument protein deneddylase	View
4U5H	A	85	Con-ikot-ikot	View
4U5H	B	87	Con-ikot-ikot	View
4U5H	C	84	Con-ikot-ikot	View
4U5H	D	85	Con-ikot-ikot	View
4U5H	E	85	Con-ikot-ikot	View
4U5H	F	85	Con-ikot-ikot	View
4U5H	G	90	Con-ikot-ikot	View
4U5H	H	86	Con-ikot-ikot	View
4UEX	A	81	Prosaposin	View
4UEX	B	81	Prosaposin	View
4UHP	B	90	Small component of pyocin AP41	View
4UHP	D	87	Small component of pyocin AP41	View
4UHP	F	94	Small component of pyocin AP41	View
4UHP	H	92	Small component of pyocin AP41	View
4UN2	B	43	Ubiquitin domain-containing protein DSK2	View
4UU9	C	65	Complement C5	View
4UU9	D	66	Complement C5	View
4UUJ	C	111	pH-gated potassium channel KcsA	View
4UZZ	A	108	Intraflagellar transport complex B protein 46 carboxy-terminal protein	View
4V2O	A	78	Prosaposin	View
4V2O	B	81	Prosaposin	View
4V2O	C	81	Prosaposin	View
4WFC	A	95	Exosome complex exonuclease RRP6	View
4WFC	B	118	Exosome complex protein LRP1	View
4WFC	C	93	Exosome complex exonuclease RRP6	View
4WFC	D	98	Exosome complex protein LRP1	View
4WFC	F	93	Exosome complex protein LRP1	View
4WNN	B	98	Histone H2B.1	View
4WNN	D	97	Histone H2B.1	View
4WNN	F	98	Histone H2B.1	View
4WNN	H	98	Histone H2B.1	View
4WV4	A	86	Transcription initiation factor TFIID subunit 10	View
4WV4	B	93	Transcription initiation factor TFIID subunit 8	View
4WWB	A	112	Nickel and cobalt resistance protein CnrR	View
4WWF	A	111	Nickel and cobalt resistance protein CnrR	View
4WWF	B	106	Nickel and cobalt resistance protein CnrR	View
4WZX	A	87	Serine/threonine-protein kinase ULK3	View
4X3I	A	71	Activity-regulated cytoskeleton-associated protein	View
4X5M	A	86	Sugar transporter SemiSWEET	View
4X5M	B	93	Sugar transporter SemiSWEET	View
4X5M	C	93	Sugar transporter SemiSWEET	View
4XA3	B	142	Microtubule-associated protein RP/EB family member 1	View
4XEK	A	137	Protein-tyrosine kinase 2-beta	View
4XNG	A	139	Uncharacterized protein MG218.1	View
4XNG	B	136	Uncharacterized protein MG218.1	View
4XNG	C	137	Uncharacterized protein MG218.1	View
4XNG	D	143	Uncharacterized protein MG218.1	View
4XVV	A	72	Acid stress chaperone HdeB	View
4Y28	G	91	photosystem I reaction center	View
4Z5H	A	72	Antitoxin HipB	View
4Z8L	F	95	SAM domain and HD domain-containing protein 1	View
4Z8T	B	95	AvrRxo1-ORF2	View
4ZC3	A	57	Terminase small subunit	View
4ZDT	B	69	Structure-specific endonuclease subunit slx4	View
4ZDT	D	69	Structure-specific endonuclease subunit slx4	View
4ZEY	A	81	Nuclear receptor-binding factor 2	View
4ZF7	A	126	Uncharacterized protein	View
4ZRL	B	62	Defective in germ line development protein 3	View
4ZV0	B	93	Uncharacterized protein	View
4ZWQ	A	136	Recombination protein uvsY	View
4ZWQ	B	135	Recombination protein uvsY	View
4ZWQ	C	134	Recombination protein uvsY	View
4ZWQ	D	135	Recombination protein uvsY	View
4ZWQ	E	135	Recombination protein uvsY	View
4ZWQ	F	134	Recombination protein uvsY	View
4ZWQ	G	132	Recombination protein uvsY	View
5A1Q	A	66	Uncharacterized protein AF_1502	View
5A1Q	B	65	Uncharacterized protein AF_1502	View
5APP	C	128	General control protein GCN4	View
5AQM	B	113	BAG family molecular chaperone regulator 1	View
5AQM	D	112	BAG family molecular chaperone regulator 1	View
5AUR	A	83	Cytochrome c-552	View
5AUR	C	83	Cytochrome c-552	View
5AUR	E	83	Cytochrome c-552	View
5AUR	G	83	Cytochrome c-552	View
5AY8	A	97	Histone H3.3	View
5AY8	D	92	Histone H2B type 1-J	View
5AY8	E	96	Histone H3.3	View
5AY8	H	92	Histone H2B type 1-J	View
5B3I	A	135	Cytochrome c prime	View
5B3I	C	135	Cytochrome c prime	View
5B3I	D	135	Cytochrome c prime	View
5B66	E	78	Cytochrome b559 subunit alpha	View
5D50	E	74	Anti-repressor protein	View
5D50	G	77	Anti-repressor protein	View
5D50	N	68	Anti-repressor protein	View
5D50	O	77	Anti-repressor protein	View
5DCK	A	71	Gag polyprotein	View
5DCK	B	72	Gag polyprotein	View
5E5Y	A	62	Snakin-1	View
5E5Y	C	61	Snakin-1	View
5E65	B	149	Hemagglutinin-esterase	View
5E65	D	149	Hemagglutinin-esterase	View
5EJD	A	75	TqaA	View
5EJD	C	74	TqaA	View
5EJD	E	72	TqaA	View
5EJD	G	75	TqaA	View
5EJD	I	72	TqaA	View
5EJD	K	73	TqaA	View
5EJD	M	70	TqaA	View
5EJD	O	74	TqaA	View
5FD3	A	108	Protein lin-54 homolog	View
5FD3	B	108	Protein lin-54 homolog	View
5FGM	A	62	ECF RNA polymerase sigma factor SigR	View
5FIG	A	100	Uncharacterized cysteine-rich protein YhjQ	View
5FIG	B	102	Uncharacterized cysteine-rich protein YhjQ	View
5FIG	C	93	Uncharacterized cysteine-rich protein YhjQ	View
5FIG	D	90	Uncharacterized cysteine-rich protein YhjQ	View
5FIG	E	100	Uncharacterized cysteine-rich protein YhjQ	View
5FIG	F	103	Uncharacterized cysteine-rich protein YhjQ	View
5FJD	A	110	Copper storage protein 1	View
5FJD	B	111	Copper storage protein 1	View
5FJD	C	110	Copper storage protein 1	View
5FJD	D	111	Copper storage protein 1	View
5FO5	A	88	HTH-type transcriptional regulator MetR	View
5G49	A	97	Nuclear transcription factor Y subunit B-6	View
5GN8	B	143	Ferritin heavy chain	View
5GYR	A	131	Cytochrome c'	View
5GYR	E	131	Cytochrome c'	View
5GYR	J	131	Cytochrome c'	View
5GYR	N	131	Cytochrome c'	View
5H2F	E	79	Cytochrome b559 subunit alpha	View
5H3G	A	93	Putative Acyl-CoA binding protein (ACBP)	View
5H3I	A	90	Putative Acyl-CoA-binding protein	View
5H3I	B	89	Putative Acyl-CoA-binding protein	View
5H3I	C	92	Putative Acyl-CoA-binding protein	View
5H3I	D	94	Putative Acyl-CoA-binding protein	View
5H9H	A	73	Acyl carrier protein	View
5H9H	B	74	Acyl carrier protein	View
5HOD	D	58	LIM/homeobox protein Lhx4	View
5HXG	B	65	Flagellar transcriptional regulator FlhD	View
5HXG	D	65	Flagellar transcriptional regulator FlhD	View
5IBK	B	46	F-box/WD repeat-containing protein 7	View
5IBK	E	48	F-box/WD repeat-containing protein 7	View
5IE9	A	94	Hypothetical Transcriptional Regulatory Protein	View
5IE9	B	94	Hypothetical Transcriptional Regulatory Protein	View
5IE9	C	95	Hypothetical Transcriptional Regulatory Protein	View
5IE9	D	92	Hypothetical Transcriptional Regulatory Protein	View
5IHF	A	105	Probable secreted protein (SPI-6 associated)	View
5IJM	A	98	Uncharacterized protein	View
5IOG	B	89	Spheroplast protein Y	View
5J43	B	101	tRNA nuclease CdiA	View
5J43	F	101	tRNA nuclease CdiA	View
5J5V	E	93	tRNA nuclease CdiA	View
5JDK	A	104	Switch-activating protein 1	View
5JNP	A	75	Probable cellulose synthase A catalytic subunit 8 [UDP-forming]	View
5JNP	B	75	Probable cellulose synthase A catalytic subunit 8 [UDP-forming]	View
5JVP	A	82	Microtubule-associated protein RP/EB family member 1	View
5JVP	B	88	Microtubule-associated protein RP/EB family member 1	View
5JVP	C	88	Microtubule-associated protein RP/EB family member 1	View
5JVP	D	85	Microtubule-associated protein RP/EB family member 1	View
5JVP	E	85	Microtubule-associated protein RP/EB family member 1	View
5JVP	F	82	Microtubule-associated protein RP/EB family member 1	View
5K29	A	97	Putative uncharacterized protein	View
5K29	B	86	Putative uncharacterized protein	View
5K89	C	89	Protein S100-A1	View
5KX4	A	95	10.7 kDa salivary protein	View
5KX4	B	93	10.7 kDa salivary protein	View
5L87	A	62	Peroxin 14	View
5LBM	A	82	Transcriptional repressor FrmR	View
5LBM	B	82	Transcriptional repressor FrmR	View
5LBM	C	89	Transcriptional repressor FrmR	View
5LBM	D	89	Transcriptional repressor FrmR	View
5LFJ	A	109	Bacterial proteasome activator	View
5LFJ	B	113	Bacterial proteasome activator	View
5LFJ	C	107	Bacterial proteasome activator	View
5LFJ	D	112	Bacterial proteasome activator	View
5LPN	B	132	Protein-methionine sulfoxide oxidase MICAL1	View
5LUT	B	52	Bloom syndrome protein homolog	View
5LUT	D	53	Bloom syndrome protein homolog	View
5LUT	F	54	Bloom syndrome protein homolog	View
5LUT	G	51	Bloom syndrome protein homolog	View
5LUT	I	47	Bloom syndrome protein homolog	View
5MJ3	C	86		View
5T59	B	90	KLLA0E05809p	View
5T59	E	90	KLLA0E05809p	View
5TIS	E	82	Cytochrome b559 subunit alpha	View
5TW1	T	53	DNA-directed RNA polymerase subunit alpha	View
5UNI	A	94	NAD(P) transhydrogenase subunit alpha 2	View
1A32	A	85	30S ribosomal protein S15	View
1AVO	B	140	Proteasome activator complex subunit 1	View
1BH9	B	89	Transcription initiation factor TFIID subunit 11	View
1C75	A	71	Cytochrome c-553	View
1CCD	A	77	Uteroglobin	View
1CCR	A	109	Cytochrome c	View
1CNT	1	150	Ciliary neurotrophic factor	View
1CPR	A	129	Cytochrome c'	View
1DUL	A	61	Signal recognition particle protein	View
1EZJ	A	114	Phosphoprotein	View
1FIP	A	73	DNA-binding protein Fis	View
1FSE	A	67	Spore germination protein GerE	View
1H3L	A	75	ECF RNA polymerase sigma factor SigR	View
1H3O	B	71	Transcription initiation factor TFIID subunit 12	View
1HBK	A	89	Acyl CoA binding protein	View
1HXI	A	108	Peroxisome targeting signal 1 receptor PEX5	View
1I2T	A	61	E3 ubiquitin-protein ligase UBR5	View
1I4D	A	188	Arfaptin-2	View
1I4Y	A	113	Hemerythrin	View
1JE8	A	63	Nitrate/nitrite response regulator protein NarL	View
1JI7	A	76	Transcription factor ETV6	View
1K04	A	142	Focal adhesion kinase 1	View
1L4A	D	75	Synaptosomal-associated protein	View
1L9L	A	74	Granulysin	View
1MQV	A	123	Cytochrome c'	View
1NLX	A	104	Pollen allergen Phl p 6	View
1OKS	A	51	Phosphoprotein	View
1ORS	C	132	Voltage-gated potassium channel	View
1PPJ	F	99	Cytochrome b-c1 complex subunit 7	View
1PUF	B	73	Pre-B-cell leukemia transcription factor 1	View
1Q08	A	94	HTH-type transcriptional regulator ZntR	View
1R5Q	A	91	Circadian clock protein KaiA	View
1SKN	P	74	Protein skinhead-1	View
1SV0	A	77	Ets DNA-binding protein pokkuri	View
1T8K	A	77	Acyl carrier protein	View
1TQG	A	105	Chemotaxis protein CheA	View
1U84	A	81	Hypothetical conserved protein	View
1UNK	A	87	Colicin-E7 immunity protein	View
1UTG	A	70	Uteroglobin	View
1V74	B	87	Colicin-D immunity protein	View
1VH6	A	96	Flagellar protein FliS	View
1W53	A	84	Phosphoserine phosphatase RsbU	View
1WVE	C	75	4-cresol dehydrogenase [hydroxylating] cytochrome c subunit	View
1X3O	A	80	Acyl carrier protein	View
1X79	A	82	ADP-ribosylation factor-binding protein GGA1	View
1XL3	C	88	Protein TyeA	View
1Y7Y	A	69	C.AhdI	View
1YTC	A	111	Cytochrome c iso-2	View
1YU5	X	67	Villin-1	View
1Z7C	A	161	Chorionic somatomammotropin hormone 2	View
1ZOY	D	102	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial	View
2A6C	A	72	Helix-turn-helix motif	View
2A6H	E	95	DNA-directed RNA polymerase subunit omega	View
2AZ0	A	70	Protein B2	View
2BL8	A	93	Probable immunity protein	View
2BLF	B	81	Sulfite:cytochrome c oxidoreductase subunit B	View
2BYK	B	89	RE06926p	View
2C1D	B	137	SoxX protein	View
2CB8	A	86	Acyl-CoA-binding protein	View
2CE0	A	99	Cytochrome c6, chloroplastic	View
2CG5	B	71	Fatty acid synthase	View
2CGQ	A	74	Acyl carrier protein	View
2D0S	A	79	Cytochrome c	View
2E1M	B	90	L-glutamate oxidase	View
2EHS	A	75	Acyl carrier protein	View
2END	A	137	Endonuclease V	View
2EWT	A	71	Putative DNA binding protein	View
2F3N	A	65	SH3 and multiple ankyrin repeat domains protein 3	View
2F4M	B	61	UV excision repair protein RAD23 homolog B	View
2FQ3	A	85	SWI/SNF complex subunit SWI3	View
2GSC	A	113	Uncharacterized protein	View
2GTA	A	92	Uncharacterized protein YpjD	View
2GTG	A	78	Prosaposin	View
2H88	D	101	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, mitochondrial	View
2HJD	A	89	Quorum-sensing antiactivator	View
2HKV	A	145	Uncharacterized protein	View
2HMZ	A	113	Hemerythrin	View
2HUJ	A	122	Lin2004 protein	View
2I5U	A	75	DnaD domain protein	View
2IB0	A	142	Uncharacterized protein	View
2IP6	A	87	PapB	View
2J9U	A	94	Vacuolar protein sorting-associated protein 28	View
2J9W	A	101	Vps28-prov protein	View
2MHR	A	118	Myohemerythrin	View
2O35	A	76	Uncharacterized protein	View
2O38	A	88	Uncharacterized protein	View
2O3L	A	77	Uncharacterized protein	View
2O5I	E	95	DNA-directed RNA polymerase subunit omega	View
2O6K	A	70	UPF0346 protein MW1311	View
2O7G	A	88	ECF RNA polymerase sigma factor SigC	View
2O8X	A	61	ECF RNA polymerase sigma factor SigC	View
2OA5	A	89	Uncharacterized protein	View
2OCH	A	66	DNaJ domain (Prokaryotic heat shock protein)	View
2OIE	A	102	dCTP pyrophosphatase 1	View
2OTA	A	66	UPF0352 protein CPS_2611	View
2OXO	A	93	Integrase	View
2P58	B	36	Yop proteins translocation protein F homolog	View
2P61	A	114	Uncharacterized protein	View
2PMS	C	109	Pneumococcal surface protein A	View
2Q73	A	90	Uncharacterized protein	View
2QAR	B	93	Transcription factor ETV6	View
2QTI	A	66	UPF0352 protein SO_2176	View
2RDC	A	130	Uncharacterized protein	View
2RJI	A	84	Erythrocyte binding protein	View
2RLD	A	111	Uncharacterized protein	View
2VQG	A	76	Putative uncharacterized protein Cgl0972	View
2W4S	A	86	Ankyrin-repeat protein	View
2WDQ	C	121	Succinate dehydrogenase cytochrome b556 subunit	View
2WDQ	D	105	Succinate dehydrogenase hydrophobic membrane anchor subunit	View
2WH5	A	90	Acyl-CoA-binding domain-containing protein 4	View
3DS4	A	77	Gag-Pol polyprotein	View
3U3B	A	104		View
4JW2	A	73		View
4UOS	A	188		View
4WSZ	A	66	Response regulator receiver domain protein	View
5GJK	A	94	SWI/SNF complex subunit SMARCC1	View
5KZA	A	94	Gag-Pro-Pol polyprotein	View
5M2S	B	79		View
5X1E	C	97	IcmO (DotL)	View
5XSJ	L	122	Signal transduction histidine kinase, LytS	View

Topology view of query protein [ProLego results]

4C2M : Y

Topology Information