ProLego Protein as lego blocks ...
 

Topology view of query protein [ProLego results]

Protein Information
PDBId & Chain3O60 : B
MoleculeLin0861 protein
Residues179
Sequence
SSE Sequence*(11) HHHHHHHHHHH
* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Hr.Hr.0.0.Ha.Hr.Hr.Hr.Hp.Hr-0.0.0.0.0.0.0.Hr.0-Hr.0.0.Ha.0.0.Hr.0-0.0.0.Hp.0.Hr.0-0.0.0.0.0.Hr-Hr.0.0.0.0-0.0.0.0-0.0.0-0.0-0

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 3O60_B
shapeImage
Protein Id: 3O60_B

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 3O60_B
shapeImage
Protein Id: 3O60_B

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 HHH Hr.Hr-0 True 2XUV:A, 2XUV:B, 2XUV:C, 2XUV:D, 2YFV:A, 2YFV:B, 3B0D:C, 3B0D:W, 3CX5:H, 3F75:P, 3MVD:B, 3MVD:F, 3NQJ:A, 3NQJ:B, 3R45:A, 3R45:B, 3V9R:D, 3X1T:B, 3X1T:F, 4CSR:B, 4E45:B, 4E45:D, 4E45:L, 4E45:N, 4H9N:B, 4YNH:A, 4YNH:B, 5AY8:B, 5AY8:F, 5BNX:A, 5BNX:B, 5DA5:Y, 5FIR:L, 5G49:B, 5JA4:A, 5JA4:B, 1A7W:A, 1B67:A, 1JFI:A, 1JKO:C, 1KU5:A, 1TAF:A, 1TAF:B, 2D3E:A, 2HUE:B, 2HUE:C, 2NXQ:A, 2YFW:B, 4ONS:B, d1b67a_, d1jfia_, d1n1jb_, d1tafa_, d1tafb_, d1zx3a1, d2huec_, d2np3a1, d2nxqa_, d3cx5h_, 1b67A00, 1b67A00, 1jfiA00, 1kx5B00, 1n1jB00, 1tafA00, 1tafB00, 1zx3A01, 2hueC00, 3cx5H00,
3 HHH Hr.0-0 True 2ZXX:D, 2ZXX:E, 3H87:D, 3KXE:C, 3KXE:D, 3PN7:D, 4FXE:A, 4FXE:B, 4J2N:B, 4J2N:D, 4QIC:B, 4QIC:D, 4Z8L:C, 5CEG:A, 5CEG:C, 1HWT:C, 1OV9:A, 1T0F:C, 1ZX3:A, 2BSQ:E, 2ER8:A, 5VJI:C, 5WWO:C, 5X3T:A, d1ov9a_, d1y9ba1, d2bska1, d2bsqe1, 1bpeA01, 1bpeA01, 1uklC00,
3 HHH 0.Ha-0 True 3FXD:B, 3HLS:A, 3HLS:B, 3MTU:A, 3MTU:B, 3MTU:C, 3MTU:D, 3PH0:A, 3S6P:G, 4HP3:C, 4LN0:C, 4M70:R, 4UG3:C, 1LWU:A, 1M93:A, 2DB7:A, 2NR5:A, 2P58:A, d1iiea_, d2db7a1, d2nr5a1, 1iieA00,
3 HHH Ha.Hr-0 True 3I71:B, 4HWF:A, 4JDX:E, 4JDX:F, 4JQU:B, 4UZZ:B, 5DA5:A, 5DA5:B, 5DA5:C, 5DA5:D, 5DA5:E, 5DA5:F, 5DA5:G, 5DA5:H, 5DA5:I, 5DA5:J, 5DA5:K, 5DA5:L, 5DA5:M, 5DA5:N, 5DA5:O, 5DA5:P, 5DA5:Q, 5DA5:R, 5DA5:S, 5DA5:T, 5DA5:U, 5DA5:V, 5DA5:X, 5DA5:Z, 5FIR:B, 5FIR:D, 5FIR:F, 5FIR:H, 5L89:A, 5L89:B, 5L89:C, 5L89:D, 5L89:E, 5L89:F, 5L89:G, 5L89:H, 5L89:I, 5L89:J, 5L89:K, 5L89:L, 5L89:M, 5L89:N, 5L89:O, 5L89:P, 5L89:Q, 5L89:R, 5L89:S, 5L89:T, 5L89:U, 5L89:V, 5L89:W, 5L89:X, 5L89:Y, 5L89:Z, 5L8G:A, 5L8G:B, 5L8G:C, 5L8G:D, 5L8G:E, 5L8G:F, 5L8G:G, 5L8G:H, 5L8G:I, 5L8G:J, 5L8G:K, 5L8G:L, 5L8G:M, 5L8G:N, 5L8G:O, 5L8G:P, 5L8G:Q, 5L8G:R, 5L8G:S, 5L8G:T, 5L8G:U, 5L8G:V, 5L8G:W, 5L8G:X, 5L8G:Y, 5L8G:Z, 1VF6:A, 2CZS:A, 2OO9:A, d1ijwc_, d1vf6a_,
3 HHH Hr.Hp-Hr False 5KP7:B, d2iu5a1, 1jjsA00,
3 HHH Hp.Hr-0 False 3HLS:C, 3HLS:G, 3NRT:C, 3NRT:F, 5DM6:2, 5LUT:A, 5LUT:H,
4 HHHH Hr.Hr.0-0.0-Hr False 4WV4:B, d1rkta1, d2g7la1,
4 HHHH Hr.0.0-0.0-0 True 3H87:C, 3V9R:A, 3V9R:C, 4Q2U:A, 4Q2U:C, 4Q2U:E, 4Q2U:G, 4Q2U:I, 4Q2U:K, 4Q2U:M, 4Q2U:O, 5FD3:A, 5FD3:B, d1ef1c_, 1y9bA00,
4 HHHH 0.0.Ha-0.0-0 False 4H9D:C, 5JVP:D, 2OTA:A, d2otaa1,
4 HHHH 0.Ha.Hr-0.0-Ha True 3ZK1:E, 3ZK1:J, 3ZK1:Q, 3ZK1:R, 3ZK1:U, 3ZK1:V,
4 HHHH Ha.Hr.Hr-0.0-0 False d1x3zb_,
Protein In ProLegoDB with identical/similar Topology