Protein Detail

Protein Information

PDBId & Chain	3LVY : F
Molecule	Alkyl hydroperoxide reductase AhpD
Residues	181
Sequence
SSE Sequence^*(9)	`HHHHHHHHH`

^* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]

Protein Topology

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand] `0.Hr.0.Ha.Ha.0.Ha.Hr-Hp.0.0.Hp.0.0.Hr-0.Hr.0.Hp.0.0-0.0.0.0.Hr-0.0.0.Hr-0.0.Ha-0.Hr-0`

Prefence of topology : False

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : 3LVY_F

Protein Id: 3LVY_F

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : 3LVY_F

Protein Id: 3LVY_F

Expand

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Modules in queried Topology

#SSE	SSE string	Contact String	Preferrence	ProteinDB	DomainsDB
3	HHH	0.Hr-Hp	False	4F3F:C, 4I6O:A, 4Z8L:B,
3	HHH	Hr.0-0	True	2ZXX:D, 2ZXX:E, 3H87:D, 3KXE:C, 3KXE:D, 3PN7:D, 4FXE:A, 4FXE:B, 4J2N:B, 4J2N:D, 4QIC:B, 4QIC:D, 4Z8L:C, 5CEG:A, 5CEG:C, 1HWT:C, 1OV9:A, 1T0F:C, 1ZX3:A, 2BSQ:E, 2ER8:A, 5VJI:C, 5WWO:C, 5X3T:A,	d1ov9a_, d1y9ba1, d2bska1, d2bsqe1, 1bpeA01, 1bpeA01, 1uklC00,
3	HHH	0.Ha-0	True	3FXD:B, 3HLS:A, 3HLS:B, 3MTU:A, 3MTU:B, 3MTU:C, 3MTU:D, 3PH0:A, 3S6P:G, 4HP3:C, 4LN0:C, 4M70:R, 4UG3:C, 1LWU:A, 1M93:A, 2DB7:A, 2NR5:A, 2P58:A,	d1iiea_, d2db7a1, d2nr5a1, 1iieA00,
3	HHH	Ha.Ha-Hp	True	2WY8:Q, 2XF7:A, 2XF7:B, 2XF7:C, 2XF7:D, 2XF7:E, 2XF7:F, 2XVT:A, 2XVT:B, 2XVT:C, 2XVT:D, 2XVT:E, 2XVT:F, 3A8Y:C, 3A8Y:D, 3BBZ:A, 3BBZ:B, 3EAB:A, 3EAB:B, 3EAB:C, 3EAB:D, 3EAB:E, 3EAB:F, 3GI7:A, 3GI7:B, 3GN4:A, 3L8R:A, 3L8R:B, 3L8R:C, 3L8R:D, 3L8R:E, 3L8R:F, 3L8R:G, 3L8R:H, 3LOF:A, 3LOF:B, 3LOF:C, 3LOF:D, 3LOF:E, 3LOF:F, 3MQ1:A, 3MQ1:B, 3MQ1:C, 3MQ1:D, 3MQ1:E, 3MQ1:F, 3MXZ:A, 3MZW:B, 3OVU:A, 3PH0:C, 3PH0:D, 3RGU:A, 3RGU:B, 3RGU:C, 3RGU:D, 3T47:A, 3UUL:A, 3UUL:B, 3UUN:A, 3UUN:B, 3ZE3:B, 3ZE3:C, 3ZE3:F, 4A5X:A, 4A5X:B, 4CC9:B, 4CQI:A, 4FM3:A, 4FM3:B, 4FM3:C, 4FM3:D, 4FZP:A, 4FZP:B, 4H10:A, 4HKZ:H, 4HWC:A, 4HWC:B, 4HWC:C, 4HWC:D, 4HWC:E, 4HWC:F, 4HWD:A, 4HWD:B, 4HWD:D, 4HWH:A, 4HWH:B, 4HWH:C, 4HWH:D, 4HWH:E, 4K12:B, 4KBQ:C, 4KBQ:D, 4MBQ:A, 4MBQ:B, 4MBQ:C, 4MBQ:D, 4MBQ:E, 4MBQ:F, 4NPD:A, 4NTW:C, 4PS2:A, 4TX5:A, 4TX5:B, 4U7I:A, 4U7Y:A, 4UI1:C, 4UI1:D, 4Z8L:E, 4ZNC:A, 4ZNC:B, 4ZNC:C, 5DJT:B, 5FVK:A, 5FVK:B, 5JSN:B, 5JSN:D, 5LB7:B, 1EZ3:A, 1LJ2:A, 1LP1:A, 1WRD:A, 1Z8U:A, 2C5K:T, 2E2A:A, 2ERL:A, 2FCW:A, 2FZT:A, 2GOM:A, 2J5Y:A, 2NOJ:B, 2V6Y:A, 2W2U:A, 3LF9:A, 3LG7:A, 3LHP:S, 3QWO:C, 3S1K:A, 4IOI:H, 4L8I:A, 4OYD:B, 5DJU:B, 5EFW:B, 5GNA:A, 5J0L:A, 5JSB:B,	d1chua1, d1cuna2, d1ez3a_, d1fpoa2, d1g73a_, d1gpja1, d1gvna_, d1hcia4, d1hf8a1, d1iura_, d1lvfa_, d1m62a_, d1nrea_, d1nu9c1, d1o3xa_, d1o7d.1, d1qsda_, d1r4ga_, d1s35a1, d1s35a2, d1u5pa1, d1u5pa2, d1uura1, d1vcta1, d1wfda_, d1wrda1, d1x4oa1, d1x4pa1, d1x9ba_, d1xvha2, d1z8ua_, d2cpta1, d2crba1, d2e2aa_, d2erla_, d2fcwa1, d2fzta1, d2goma1, d2j5ya_, d2pmra1, d2qalt1, d2uubt1, d3bvua1, d3l8ra_, d3ldqb_, d3qwoc_, 1deeG00, 1deeG00, 1ez3A00, 1g73A00, 1gvnC00, 1hciA04, 1lj2A00, 1lp1B00, 1lreA00, 1lvfB00, 1m62A00, 1o3xA00, 1qsdA00, 1r73A00, 1t6oA00, 1wfdA00, 1x9bA00, 2e2aA00, 2erlA00, 2vqeT00,
3	HHH	Ha.0-0	False	3BPJ:A, 3BPJ:B, 3BPJ:C, 3BPJ:D, 3MTU:E, 3MTU:F, 4CLQ:B, 4HFX:A, 4IAO:C, 4IAO:D, 4OM3:A, 4X86:A, 4YTW:A, 4YTW:C, 5FD9:A, 1YKH:B, 2B9C:A,	d1ykhb1, d2bskb1,
3	HHH	Ha.Hr-Hr	True	2ZKO:A, 2ZKO:B, 3A01:A, 3A01:B, 3A01:E, 3A01:F, 3A02:A, 3A03:A, 3B0F:A, 3B0F:B, 3C57:A, 3CMY:A, 3FF5:A, 3FF5:B, 3L4Q:C, 3L4Q:D, 3M8A:A, 3M8A:D, 3M8A:F, 3M8A:G, 3M8A:I, 3M8A:K, 3RKQ:A, 3RKQ:B, 3RQ9:A, 3RT3:C, 3VFZ:A, 4CVD:A, 4CYC:A, 4CYC:B, 4HWF:B, 4J19:A, 4J19:B, 4RDU:A, 4RDU:D, 5AKO:A, 5AKO:B, 5B5I:A, 5B5I:B, 5BY1:A, 5BY1:B, 5COS:A, 5COS:B, 5COS:C, 5COS:D, 5DQS:D, 5EEA:A, 5EEA:B, 5EEA:G, 5EEA:J, 5EF6:A, 5EF6:B, 5EF6:G, 5EF6:J, 5H5N:A, 5H5N:B, 5HOD:A, 5JLW:A, 5JLW:D, 1AIL:A, 1B72:A, 1FJL:A, 1IG7:A, 1JGG:A, 1K61:A, 1KU3:A, 1LE8:A, 1PUF:A, 1VF6:C, 1ZOQ:C, 2H1K:A, 2P7V:B, 2R5Z:A, 2VI6:A, 5LTY:K,	d1akha_, d1bw5a_, d1e3ha1, d1e3oc1, d1gdta1, d1hp8a_, d1iufa1, d1ixsa_, d1k61a_, d1k78a1, d1k99a_, d1ku3a_, d1lfba_, d1nk2p_, d1pufa_, d1rp3a3, d1rsob_, d1s7ea1, d1tc3c_, d1ug2a_, d1uhsa_, d1umqa_, d1vf6c_, d1wh7a_, d1x2ma1, d1x41a1, d1xeqa1, d1zoqc_, d2coba1, d2cpwa1, d2cqqa1, d2cu7a1, d2cufa1, d2ecba1, d2ecca1, d2hosa_, d2zkoa_, d3a02a_, d3b0fa_, 1b72A00, 1b8iA00, 1b8iB00, 1b72A00, 1b8iA00, 1b8iB00, 1e3pA02, 1hcrA00, 1hp8A00, 1ixsA00, 1jggA00, 1k61A00, 1k99A00, 1ku3A00, 1lfbA00, 1nk3P00, 1rsoB00, 1tc3C00, 1umqA00, 1vf6C00, 1wh5A00, 2hddB00,
4	HHHH	0.Hr.0-Hp.0-0	False	3HHW:C,
4	HHHH	Hr.0.Ha-0.0-Hr	False		d3bzka2,
4	HHHH	0.Ha.Ha-0.Hp-0	True	3LBX:A, 3TUL:B, 3TUL:C, 4MYY:A, 4RKU:L, 1A32:A, 1K04:A,	d1a32a_, d1k04a_, 1a32A00, 1a32A00,
4	HHHH	Ha.Ha.0-Hp.0-Hp	False	3H36:A,
4	HHHH	Ha.0.Ha-0.0-0	True	5GYR:A, 5GYR:E, 5GYR:J, 5GYR:N, 5LBM:A,
4	HHHH	0.Ha.Hr-0.Hr-0	False	4A69:C,

Protein In ProLegoDB with identical/similar Topology

Proteins with Identical Topology

[Same secondary structure composition, contact-pair and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology

Protein with similar Topology [same scaffold]

[Same secondary structure composition and contact-pair but of different orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology

Proteins with topologies of same secondary structure (H/E) component

[Topologies with same secondary structure composition with different contact-pairs and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
2XOL	A	168	Tat proofreading chaperone TtrD	View
2XOL	B	172	Tat proofreading chaperone TtrD	View
2XOV	A	181	Rhomboid protease GlpG	View
2YVE	A	175	Transcriptional regulator	View
2YVE	B	172	Transcriptional regulator	View
2Z16	A	153	Matrix protein 1	View
2Z16	B	150	Matrix protein 1	View
2Z37	B	244	Chitinase	View
2ZCA	A	154	CRISPR-associated protein Cse2	View
2ZCA	B	157	CRISPR-associated protein Cse2	View
2ZCM	B	175	Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR	View
3BOM	D	147	Hemoglobin subunit beta-4	View
3BQZ	A	186	HTH-type transcriptional regulator QacR	View
3BQZ	B	180	HTH-type transcriptional regulator QacR	View
3BRU	A	188	Transcriptional regulator AcuR	View
3BRU	B	186	Transcriptional regulator AcuR	View
3C1D	A	143	Regulatory protein RecX	View
3C1Q	A	111	Type II secretion system protein F	View
3C1Q	B	112	Type II secretion system protein F	View
3C7L	A	124	Regulator of G-protein signaling 16	View
3C7L	B	128	Regulator of G-protein signaling 16	View
3CQL	A	243	Endochitinase	View
3CQL	B	243	Endochitinase	View
3CR3	A	185	PTS-dependent dihydroxyacetone kinase, ADP-binding subunit DhaL	View
3CRA	B	222	Nucleoside triphosphate pyrophosphohydrolase	View
3D1K	B	146	Hemoglobin subunit beta-1/2	View
3DBJ	E	160	Allophycocyanin alpha subunit	View
3DFG	A	142	Regulatory protein RecX	View
3E3V	A	154	Regulatory protein RecX	View
3EDV	A	322	Spectrin beta chain, non-erythrocytic 1	View
3EGW	C	224	Respiratory nitrate reductase 1 gamma chain	View
3F0C	A	187	Transcriptional regulator	View
3F1B	A	178	Probable transcriptional regulator	View
3F7C	A	192	Uncharacterized protein	View
3FB2	A	183	Spectrin alpha chain, non-erythrocytic 1	View
3FH3	A	138	Uncharacterized protein	View
3FH3	B	139	Uncharacterized protein	View
3FRQ	A	185	Uncharacterized protein	View
3FRQ	B	184	Uncharacterized protein	View
3FRR	A	186	IST1 homolog	View
3G6I	A	197	Uncharacterized protein	View
3G7R	A	187	Putative transcriptional regulator	View
3G9G	A	250	Suppressor of yeast profilin deletion	View
3GD8	A	223	Aquaporin-4	View
3GEU	A	184	Biofilm operon icaADBC HTH-type negative transcriptional regulator IcaR	View
3GYZ	B	143	Chaperone protein IpgC	View
3HBE	X	204	Class IV chitinase Chia4-Pa2	View
3HZS	A	209	Monofunctional glycosyltransferase	View
3I2W	A	265	Syndapin, isoform B	View
3IXE	A	171	Integrin-linked protein kinase	View
3JSJ	A	181	Putative TetR-family transcriptional regulator	View
3JSJ	B	181	Putative TetR-family transcriptional regulator	View
3JSJ	C	180	Putative TetR-family transcriptional regulator	View
3JSJ	D	181	Putative TetR-family transcriptional regulator	View
3JUI	A	169	Translation initiation factor eIF-2B subunit epsilon	View
3JW4	A	118	Transcriptional regulator, MarR/EmrR family	View
3KVS	B	169	C-phycocyanin beta chain	View
3L0F	B	171	C-phycocyanin beta chain	View
3L1N	A	152	Cell wall mannoprotein 1	View
3L8N	A	173	Brefeldin A-inhibited guanine nucleotide-exchange protein 2	View
3LEV	A	177	RNA polymerase sigma factor SigA	View
3LLQ	A	228	Aquaporin Z 2	View
3LSG	A	101	Two-component response regulator yesN	View
3LSG	B	101	Two-component response regulator yesN	View
3LSG	C	100	Two-component response regulator yesN	View
3LSJ	A	205	DesT	View
3LSJ	B	204	DesT	View
3LVY	A	181	Alkyl hydroperoxide reductase AhpD	View
3LVY	B	180	Alkyl hydroperoxide reductase AhpD	View
3LVY	D	177	Alkyl hydroperoxide reductase AhpD	View
3LVY	E	172	Alkyl hydroperoxide reductase AhpD	View
3NE2	F	244	Probable aquaporin AqpM	View
3NFQ	A	145	Transcription factor SPN1	View
3NFQ	B	141	Transcription factor SPN1	View
3NKE	A	182	CRISPR-associated endonuclease Cas1	View
3NKE	B	182	CRISPR-associated endonuclease Cas1	View
3NKE	C	181	CRISPR-associated endonuclease Cas1	View
3NR1	A	178	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1	View
3NR1	B	178	Guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase MESH1	View
3OA7	A	188	Chaotic nuclear migration protein 67	View
3OAO	A	136	Uncharacterized protein	View
3ON2	A	187	Probable transcriptional regulator	View
3OX6	A	153	Calcium-binding protein 1	View
3OX6	B	153	Calcium-binding protein 1	View
3OX6	C	153	Calcium-binding protein 1	View
3OX6	D	146	Calcium-binding protein 1	View
3PRU	B	142	Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 1	View
3PRU	C	135	Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 1	View
3PRU	D	133	Phycobilisome 32.1 kDa linker polypeptide, phycocyanin-associated, rod 1	View
3PVT	B	237	1,2-phenylacetyl-CoA epoxidase, subunit C	View
3PVT	C	248	1,2-phenylacetyl-CoA epoxidase, subunit C	View
3QB5	A	213	Translin	View
3QBM	A	194	Regulatory protein TetR	View
3QBR	A	163	SJCHGC06286 protein	View
3QBR	X	161	SJCHGC06286 protein	View
3QC7	A	164	Capsid fiber protein	View
3RD3	A	187	Probable transcriptional regulator	View
3RD3	B	187	Probable transcriptional regulator	View
3RF3	B	258	Vinculin	View
3RGB	C	213	Methane monooxygenase, C subunit	View
3RGB	G	213	Methane monooxygenase, C subunit	View
3RGB	K	213	Methane monooxygenase, C subunit	View
3TUI	B	216	D-methionine transport system permease protein MetI	View
3TUI	F	216	D-methionine transport system permease protein MetI	View
3TX3	A	227	Sulfate transporter CysZ	View
3U9J	A	151	F-box/LRR-repeat protein 5	View
3U9J	B	151	F-box/LRR-repeat protein 5	View
3V57	B	176	B-phycoerythrin beta chain	View
3V57	D	176	B-phycoerythrin beta chain	View
3VIB	A	193	HTH-type transcriptional regulator MtrR	View
3VIB	B	194	HTH-type transcriptional regulator MtrR	View
3VIB	C	201	HTH-type transcriptional regulator MtrR	View
3VIB	D	194	HTH-type transcriptional regulator MtrR	View
3VUQ	A	178	Transcriptional regulator (TetR/AcrR family)	View
3VUQ	B	176	Transcriptional regulator (TetR/AcrR family)	View
3W3E	B	242	Cotyledoneous yieldin-like protein	View
3WH1	A	203	Chitinase A	View
3WXX	A	145	AcrH	View
3WXX	B	174	Uncharacterized protein	View
3WXX	C	145	AcrH	View
3WXX	D	174	Uncharacterized protein	View
3WXX	E	146	AcrH	View
3WXX	F	174	Uncharacterized protein	View
3WXX	G	146	AcrH	View
3WXX	H	174	Uncharacterized protein	View
3ZOJ	A	263	Aquaporin PIP2-7 7	View
4ALY	A	211	P35 antigen	View
4ALY	B	187	P35 antigen	View
4B4S	A	148	Bcl-2-like protein 10	View
4BHK	A	158	Predicted protein	View
4BHK	B	158	Predicted protein	View
4BJA	A	182	GLoBin related	View
4BJT	A	152	DNA-binding protein RAP1	View
4BJT	B	152	DNA-binding protein RAP1	View
4BJT	C	152	DNA-binding protein RAP1	View
4BSZ	B	150	Ankyrin repeat-containing protein YAR1	View
4CBE	A	209	Complement regulator-acquiring surface protein 2 (CRASP-2)	View
4CS9	A	158	Transcription elongation factor M2-1	View
4CS9	B	164	Transcription elongation factor M2-1	View
4CS9	C	165	Transcription elongation factor M2-1	View
4CS9	E	164	Transcription elongation factor M2-1	View
4CYM	E	165	Ankyrin repeat domain-containing protein 27	View
4CYM	F	166	Ankyrin repeat domain-containing protein 27	View
4DBG	B	146	E3 ubiquitin-protein ligase RNF31	View
4F0T	B	171	C-phycocyanin beta chain	View
4F0U	A	160	Allophycocyanin alpha chain	View
4F0U	B	160	Allophycocyanin, beta subunit	View
4F0U	C	160	Allophycocyanin alpha chain	View
4F0U	E	160	Allophycocyanin alpha chain	View
4F0U	F	160	Allophycocyanin, beta subunit	View
4GA2	A	144	E3 SUMO-protein ligase RanBP2	View
4GCK	A	190	Nucleoid occlusion factor SlmA	View
4GCK	C	190	Nucleoid occlusion factor SlmA	View
4GYV	E	211	FERM, RhoGEF and pleckstrin domain-containing protein 2	View
4H0M	A	162	C-phycocyanin alpha chain	View
4H0M	B	171	C-phycocyanin beta chain	View
4H0M	C	162	C-phycocyanin alpha chain	View
4H0M	D	171	C-phycocyanin beta chain	View
4H0M	E	162	C-phycocyanin alpha chain	View
4H0M	F	171	C-phycocyanin beta chain	View
4H0M	G	162	C-phycocyanin alpha chain	View
4H0M	H	171	C-phycocyanin beta chain	View
4H0M	I	162	C-phycocyanin alpha chain	View
4H0M	J	171	C-phycocyanin beta chain	View
4H0M	L	171	C-phycocyanin beta chain	View
4H0M	M	162	C-phycocyanin alpha chain	View
4H0M	N	171	C-phycocyanin beta chain	View
4H0M	O	162	C-phycocyanin alpha chain	View
4H0M	Q	162	C-phycocyanin alpha chain	View
4H0M	R	171	C-phycocyanin beta chain	View
4H0M	U	162	C-phycocyanin alpha chain	View
4H0M	V	171	C-phycocyanin beta chain	View
4H0M	W	162	C-phycocyanin alpha chain	View
4H0M	X	171	C-phycocyanin beta chain	View
4HI8	A	170	Integrin-linked protein kinase	View
4HRR	B	151	Globin-2 B chain	View
4HRR	D	151	Globin-2 B chain	View
4HRR	F	151	Globin-2 B chain	View
4HRR	H	150	Globin-2 B chain	View
4IGU	A	137	LD40005p	View
4IGU	B	137	LD40005p	View
4IRV	A	195	Cytotoxicity-associated immunodominant antigen	View
4IRV	B	192	Cytotoxicity-associated immunodominant antigen	View
4IRV	C	190	Cytotoxicity-associated immunodominant antigen	View
4IRV	D	196	Cytotoxicity-associated immunodominant antigen	View
4IT5	A	157	Co-chaperone protein HscB homolog	View
4IT5	B	163	Co-chaperone protein HscB homolog	View
4IT5	C	156	Co-chaperone protein HscB homolog	View
4JQ6	A	197	Proteorhodopsin	View
4JQ6	B	203	Proteorhodopsin	View
4JQ6	C	199	Proteorhodopsin	View
4K84	A	206	Ceramide-1-phosphate transfer protein	View
4K84	B	207	Ceramide-1-phosphate transfer protein	View
4KBR	A	206	Ceramide-1-phosphate transfer protein	View
4KBR	C	205	Ceramide-1-phosphate transfer protein	View
4KBR	D	202	Ceramide-1-phosphate transfer protein	View
4KBR	F	202	Ceramide-1-phosphate transfer protein	View
4KBR	G	203	Ceramide-1-phosphate transfer protein	View
4KBR	H	203	Ceramide-1-phosphate transfer protein	View
4KNF	A	231	Blue-light absorbing proteorhodopsin	View
4KNF	B	224	Blue-light absorbing proteorhodopsin	View
4KNF	C	232	Blue-light absorbing proteorhodopsin	View
4KNF	D	229	Blue-light absorbing proteorhodopsin	View
4KNF	E	230	Blue-light absorbing proteorhodopsin	View
4KT6	B	161	Uncharacterized protein	View
4KT6	D	161	Uncharacterized protein	View
4LJX	A	118	AT-rich interactive domain-containing protein 3A	View
4LJX	B	118	AT-rich interactive domain-containing protein 3A	View
4LM6	B	177	Phycoerythrin beta subunit	View
4LM6	D	175	Phycoerythrin beta subunit	View
4LMX	B	177	Phycoerythrin550 beta subunit	View
4LMX	D	175	Phycoerythrin550 beta subunit	View
4LMX	F	176	Phycoerythrin550 beta subunit	View
4LMX	H	176	Phycoerythrin550 beta subunit	View
4LMX	J	175	Phycoerythrin550 beta subunit	View
4LMX	L	175	Phycoerythrin550 beta subunit	View
4MCK	A	201	Endochitinase A	View
4NEF	D	232	Aquaporin-2	View
4NQ0	A	254	HAT1-interacting factor 1	View
4O6Y	B	211	Probable transmembrane ascorbate ferrireductase 2	View
4P3G	C	180	Signal recognition particle subunit SRP68	View
4P3G	D	191	Signal recognition particle subunit SRP68	View
4PO5	A	162	Allophycocyanin subunit alpha-B	View
4PO5	C	162	Allophycocyanin subunit alpha-B	View
4PO5	E	162	Allophycocyanin subunit alpha-B	View
4QN8	A	148	VipE	View
4QN8	B	148	VipE	View
4QN8	C	144	VipE	View
4RC8	A	222	Aldehyde decarbonylase	View
4RD8	A	205	Uncharacterized protein	View
4S1B	A	213	Lmo1466 protein	View
4S1B	D	214	Lmo1466 protein	View
4UIQ	A	154	Uncharacterized protein	View
4W8P	A	301	Talin-1	View
4W97	A	196	HTH-type transcriptional repressor KstR2	View
4WFE	A	253	Potassium channel subfamily K member 4	View
4X0J	A	261	Haptoglobin-hemoglobin receptor	View
4X51	A	142	Interleukin-10	View
4X51	B	141	Interleukin-10	View
4XB4	B	145	Orange carotenoid-binding protein	View
4XI8	A	211	Bartonella effector protein (Bep) substrate of VirB T4SS	View
4XI8	B	208	Bartonella effector protein (Bep) substrate of VirB T4SS	View
4XI8	D	206	Bartonella effector protein (Bep) substrate of VirB T4SS	View
4XI8	E	208	Bartonella effector protein (Bep) substrate of VirB T4SS	View
4XXI	A	147	Phycobiliprotein ApcE	View
4YF1	A	155	Lmo0812 protein	View
4YJJ	B	171	Phycocyanin-Beta subunit	View
4YJJ	C	162	Phycocyanin-Alpha subunit	View
4YJJ	D	171	Phycocyanin-Beta subunit	View
4YMU	C	214	ABC-type amino acid transport system, permease component	View
4YZE	B	186	HTH-type transcriptional repressor NemR	View
4YZE	C	189	HTH-type transcriptional repressor NemR	View
5AQC	A	183	HTH-type transcriptional repressor KstR	View
5AQC	B	181	HTH-type transcriptional repressor KstR	View
5B13	G	177	Phycoerythrin beta subunit	View
5B13	H	177	Phycoerythrin beta subunit	View
5B13	I	177	Phycoerythrin beta subunit	View
5B13	J	177	Phycoerythrin beta subunit	View
5B13	K	177	Phycoerythrin beta subunit	View
5B13	L	177	Phycoerythrin beta subunit	View
5C5S	A	210	Unconventional myosin-IXb	View
5C5S	B	202	Unconventional myosin-IXb	View
5C5S	C	202	Unconventional myosin-IXb	View
5C5S	D	203	Unconventional myosin-IXb	View
5D18	A	202	TetR family transcriptional regulator	View
5DO9	B	134	Regulator of G-protein signaling 8	View
5DO9	D	134	Regulator of G-protein signaling 8	View
5DO9	F	134	Regulator of G-protein signaling 8	View
5E57	B	200	Transcriptional regulator, TetR family	View
5E57	C	207	Transcriptional regulator, TetR family	View
5EE5	A	201	Brefeldin A-inhibited guanine nucleotide-exchange protein 1	View
5EYR	A	193	HTH-type transcriptional regulator EthR	View
5FVB	O	183	Phycoerythrin Beta subunit	View
5FVB	X	183	Phycoerythrin Beta subunit	View
5GP9	A	193	Transcriptional regulator (TetR/AcrR family)	View
5GP9	B	187	Transcriptional regulator (TetR/AcrR family)	View
5HAW	A	186	Nucleoid occlusion factor SlmA	View
5I32	A	238	Aquaporin TIP2-1	View
5IQP	A	230	14-3-3 protein theta	View
5IQP	B	229	14-3-3 protein theta	View
5J08	A	163	Epsin-5	View
5JEA	K	185	Superkiller protein 7	View
5LU2	A	230	14-3-3 protein sigma	View
5LU2	B	227	14-3-3 protein sigma	View
5LX9	A	283	Adiponectin receptor protein 2	View
5M1M	A	154	Polyprotein p42	View
5MQQ	A	203	Repressor of the high-affinity (Methyl) ammonium uptake system	View
5MQQ	B	199	Repressor of the high-affinity (Methyl) ammonium uptake system	View
5MQQ	C	202	Repressor of the high-affinity (Methyl) ammonium uptake system	View
5MQQ	D	203	Repressor of the high-affinity (Methyl) ammonium uptake system	View
5MQQ	E	202	Repressor of the high-affinity (Methyl) ammonium uptake system	View
5N7O	A	191	TetR family transcriptional regulator	View
5N7O	B	191	TetR family transcriptional regulator	View
5SVE	B	165	Calcineurin subunit B type 1	View
5TOU	B	171	Phycocyanin beta-1 subunit	View
5TOU	D	171	Phycocyanin beta-1 subunit	View
5TOU	F	171	Phycocyanin beta-1 subunit	View
5TOU	H	171	Phycocyanin beta-1 subunit	View
5TOU	J	171	Phycocyanin beta-1 subunit	View
5TOU	L	171	Phycocyanin beta-1 subunit	View
5V6G	A	157	Matrix protein 1	View
5V6G	B	157	Matrix protein 1	View
5V6G	C	157	Matrix protein 1	View
5V6G	D	157	Matrix protein 1	View
5V87	A	147	La-related protein 1	View
5V87	B	148	La-related protein 1	View
5WTR	C	196	Uncharacterized protein	View
5WTR	F	197	Uncharacterized protein	View
1AGR	E	128	Regulator of G-protein signaling 4	View
1AH7	A	245	Phospholipase C	View
1ALL	A	160	Allophycocyanin alpha chain	View
1B33	A	160	Allophycocyanin alpha chain	View
1B8D	B	176	R-phycoerythrin beta chain	View
1CPC	A	162	C-phycocyanin-1 alpha chain	View
1CPC	B	171	C-phycocyanin-1 beta chain	View
1ELK	A	153	Target of Myb protein 1	View
1EYX	B	176	R-phycoerythrin beta chain	View
1F99	A	162	R-phycocyanin alpha chain	View
1F99	B	172	R-phycocyanin beta chain	View
1FCD	C	174	Cytochrome subunit of sulfide dehydrogenase	View
1GH0	A	162	C-phycocyanin alpha chain	View
1GH0	B	171	C-phycocyanin beta chain	View
1HLB	A	157	Globin C, coelomic	View
1J1J	A	217	Translin	View
1J4N	A	249	Aquaporin-1	View
1KN1	A	160	Allophycocyanin alpha chain	View
1KPS	B	156	Ran GTPase-activating protein 1	View
1OR7	A	181	ECF RNA polymerase sigma-E factor	View
1OTK	A	244	1,2-phenylacetyl-CoA epoxidase, subunit C	View
1OUT	B	146	Hemoglobin subunit beta-1	View
1PAQ	A	156	Translation initiation factor eIF-2B subunit epsilon	View
1QKR	A	172	Vinculin	View
1QLE	C	273	Cytochrome c oxidase subunit 3	View
1R0D	A	189	Huntingtin-interacting protein 1-related protein	View
1V4X	B	146	Hemoglobin beta chain	View
1WVV	A	209	Chitinase C	View
1XG0	C	173	B-phycoerythrin beta chain	View
1XIO	A	217	Bacteriorhodopsin	View
1Y9I	A	158	Low temperature requirement C protein, also similar to B. subtilis YutG protein	View
1YMG	A	233	Lens fiber major intrinsic protein	View
1Z67	A	126	Uncharacterized protein	View
1ZK8	A	176	Transcriptional regulator, TetR family	View
2A72	A	133	Regulator of G-protein signaling 7	View
2AAO	A	139	Calcium-dependent protein kinase 1	View
2BS2	C	255	Fumarate reductase cytochrome b subunit	View
2BT2	A	143	Regulator of G-protein signaling 16	View
2BV1	A	134	Regulator of G-protein signaling 1	View
2BV8	A	162	C-phycocyanin alpha subunit	View
2BV8	B	171	C-phycocyanin beta subunit	View
2C63	A	233	14-3-3 protein eta	View
2CJL	A	204	Secreted chitinase	View
2D1L	A	240	Metastasis suppressor protein 1	View
2DG7	A	185	Putative transcriptional regulator	View
2DG8	A	175	Putative tetR-family transcriptional regulatory protein	View
2EJN	A	146	Major allergen I polypeptide chain 2	View
2ES0	A	129	Regulator of G-protein signaling 6	View
2FD5	A	180	Probable transcriptional regulator	View
2FM9	A	201	Cell invasion protein SipA	View
2GMY	A	147	Alkyl hydroperoxide reductase AhpD	View
2HYJ	A	193	Putative tetR-family transcriptional regulator	View
2ICW	G	213	Superantigen	View
2ID3	A	190	Putative transcriptional regulator	View
2IHD	A	127	Regulator of G-protein signaling 8	View
2ILK	A	155	Interleukin-10	View
2O7A	A	115	Endolysin	View
2OER	A	178	Probable transcriptional regulator	View
2OJ4	A	127	Regulator of G-protein signaling 3	View
2OKU	A	118	Acyl-CoA dehydrogenase family protein	View
2OU3	A	156		View
2OVJ	A	201	Rac GTPase-activating protein 1	View
2PAQ	A	171	5'-deoxynucleotidase YfbR	View
2QWT	A	167	Transcriptional regulator, TetR family	View
2R6A	C	135	DNA primase	View
2RAE	A	193	Transcriptional regulator, AcrR family protein	View
2REK	A	172	Putative tetR-family transcriptional regulator	View
2RG8	A	145	Programmed cell death protein 4	View
2VJH	B	176	Phycoerythrin beta subunit	View
2VJT	A	160	Allophycocyanin alpha subunit	View
2VML	B	172	Phycocyanin beta chain	View
2VPZ	C	251	Hypothetical membrane spanning protein	View
2VY1	A	164	Protein LEAFY	View
2W53	A	202	Repressor	View
2WH6	A	157	Apoptosis regulator BHRF1	View

Topology view of query protein [ProLego results]

3LVY : F

Topology Information