ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d2bska1 g.83.1.1 73 see topology u'Mitochondrial import inner membrane translocase subunit Tim9' Homo sapiens
ASTRAL-1.75B d2bskb1 g.83.1.1 59 see topology u'Mitochondrial import inner membrane translocase subunit Tim10' Homo sapiens
ASTRAL-1.75B d1wvka_ g.82.1.1 86 see topology u'Uncharacterized protein At2g23090' Arabidopsis thaliana
ASTRAL-1.75B d1vzya2 g.81.1.1 57 see topology u'33 kDa chaperonin' Bacillus subtilis
ASTRAL-1.75B d1xjha_ g.81.1.1 62 see topology u'33 kDa chaperonin' Escherichia coli
ASTRAL-1.75B d1wfea_ g.80.1.1 86 see topology u'AN1-type zinc finger protein 1' Mus musculus
ASTRAL-1.75B d2uuyb1 g.8.1.3 51 see topology u'Tryptase inhibitor' Rhipicephalus appendiculatus
ASTRAL-1.75B d1d0da_ g.8.1.2 60 see topology u'Tick anticoagulant peptide' Ornithodoros moubata
ASTRAL-1.75B d1tocr1 g.8.1.2 56 see topology u'Ornithodorin' Ornithodoros moubata
ASTRAL-1.75B d1tocr2 g.8.1.2 63 see topology u'Ornithodorin' Ornithodoros moubata
ASTRAL-1.75B d1bika1 g.8.1.1 54 see topology u'Protein AMBP' Homo sapiens
ASTRAL-1.75B d1bunb_ g.8.1.1 61 see topology u'Kunitz-type serine protease inhibitor homolog beta-bungarotoxin B2 chain' Bungarus multicinctus
ASTRAL-1.75B d1dtxa_ g.8.1.1 58 see topology u'Kunitz-type serine protease inhibitor homolog alpha-dendrotoxin' Dendroaspis angusticeps
ASTRAL-1.75B d1g6xa_ g.8.1.1 58 see topology u'Pancreatic trypsin inhibitor' Bos taurus
ASTRAL-1.75B d1ktha_ g.8.1.1 58 see topology u'Collagen alpha-3(VI) chain' Homo sapiens
ASTRAL-1.75B d3m7qb_ g.8.1.1 61 see topology u'PI-stichotoxin-She2a' Stichodactyla helianthus
ASTRAL-1.75B d1yc0i_ g.8.1.0 66 see topology u'Kunitz-type protease inhibitor 1' Homo sapiens
ASTRAL-1.75B d2ayda_ g.79.1.0 76 see topology u'WRKY transcription factor 1' Arabidopsis thaliana
ASTRAL-1.75B d1sse.1 g.78.1.1 121 see topology — —
ASTRAL-1.75B d1rgxa_ g.77.1.1 89 see topology u'Resistin' Mus musculus
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins