ProLego Protein as lego blocks ...
 
Protein Information
Domain Id d5eaua2
DB_Source-ClassASTRAL-1.75B, a.128.1.3
Moleculeu'5-epi-aristolochene synthase'
Residues323
Sequence
SSE Sequence*(15) HHHHHHHHHHHHHHH
Protein Topology 

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand]
Ha.Hr.Ha.Hp.Ha.Hr.0.Ha.0.Hr.Hr.Hr.Ha.Hr-Hr.0.Ha.Ha.0.Ha.0.Hr.0.Hr.0.0.0-0.0.Hp.0.Hp.Hp.Hr.0.0.Ha.0.0-0.0.0.0.0.0.0.0.0.Hp.0-0.0.Ha.0.0.0.Ha.0.0.0-0.0.0.0.0.0.Hr.Hr.0-0.0.0.0.0.0.0.0-0.0.0.0.0.0.0-0.0.0.0.0.0-0.0.0.0.0-0.0.0.0-0.Hr.0-0.Hr-Hr

Prefence of topology : False

Linear Topology Graph : d5eaua2
shapeImage
Protein Id: d5eaua2
Topology Graph : d5eaua2
shapeImage
Protein Id: d5eaua2
Modules in queried Topology
#SSE SSE string Contact String Preferrence  ProteinDB  DomainsDB
3 HHH Ha.Hr-Hr True 2ZKO:A, 2ZKO:B, 3A01:A, 3A01:B, 3A01:E, 3A01:F, 3A02:A, 3A03:A, 3B0F:A, 3B0F:B, 3C57:A, 3CMY:A, 3FF5:A, 3FF5:B, 3L4Q:C, 3L4Q:D, 3M8A:A, 3M8A:D, 3M8A:F, 3M8A:G, 3M8A:I, 3M8A:K, 3RKQ:A, 3RKQ:B, 3RQ9:A, 3RT3:C, 3VFZ:A, 4CVD:A, 4CYC:A, 4CYC:B, 4HWF:B, 4J19:A, 4J19:B, 4RDU:A, 4RDU:D, 5AKO:A, 5AKO:B, 5B5I:A, 5B5I:B, 5BY1:A, 5BY1:B, 5COS:A, 5COS:B, 5COS:C, 5COS:D, 5DQS:D, 5EEA:A, 5EEA:B, 5EEA:G, 5EEA:J, 5EF6:A, 5EF6:B, 5EF6:G, 5EF6:J, 5H5N:A, 5H5N:B, 5HOD:A, 5JLW:A, 5JLW:D, 1AIL:A, 1B72:A, 1FJL:A, 1IG7:A, 1JGG:A, 1K61:A, 1KU3:A, 1LE8:A, 1PUF:A, 1VF6:C, 1ZOQ:C, 2H1K:A, 2P7V:B, 2R5Z:A, 2VI6:A, 5LTY:K, d1akha_, d1bw5a_, d1e3ha1, d1e3oc1, d1gdta1, d1hp8a_, d1iufa1, d1ixsa_, d1k61a_, d1k78a1, d1k99a_, d1ku3a_, d1lfba_, d1nk2p_, d1pufa_, d1rp3a3, d1rsob_, d1s7ea1, d1tc3c_, d1ug2a_, d1uhsa_, d1umqa_, d1vf6c_, d1wh7a_, d1x2ma1, d1x41a1, d1xeqa1, d1zoqc_, d2coba1, d2cpwa1, d2cqqa1, d2cu7a1, d2cufa1, d2ecba1, d2ecca1, d2hosa_, d2zkoa_, d3a02a_, d3b0fa_, 1b72A00, 1b8iA00, 1b8iB00, 1b72A00, 1b8iA00, 1b8iB00, 1e3pA02, 1hcrA00, 1hp8A00, 1ixsA00, 1jggA00, 1k61A00, 1k99A00, 1ku3A00, 1lfbA00, 1nk3P00, 1rsoB00, 1tc3C00, 1umqA00, 1vf6C00, 1wh5A00, 2hddB00,
3 HHH Hr.Ha-0 False 3GNA:A, 3IM3:A, 3TER:A, 3TER:B, 4E45:G, 4F9K:B, 4F9K:C, 4F9K:D, 4KP3:D, d1kxpd3, d1tjla1, d2jrxa1, d3im3a_,
3 HHH Ha.Hp-Ha False 3OGI:D, 1M5I:A, d1dv5a_, d1e7la1, 1dv5A00, 1e52A00, 1m5iA00,
3 HHH Hp.Ha-Ha True 2XQU:A, 2XQU:B, 2XQU:C, 2XQU:D, 2XQU:E, 2ZJR:V, 3WKR:C, 3WKR:D, 3WKR:G, 3WKR:H, 2R9I:A, d1coja1, d1ivsa1, d1joya_, d1nh2b_, d1wb8a1, d2c2aa1, d2qamx1, 1joyA00, 1lr1A00, 1nh2B00,
3 HHH Ha.Hr-0 True 3I71:B, 4HWF:A, 4JDX:E, 4JDX:F, 4JQU:B, 4UZZ:B, 5DA5:A, 5DA5:B, 5DA5:C, 5DA5:D, 5DA5:E, 5DA5:F, 5DA5:G, 5DA5:H, 5DA5:I, 5DA5:J, 5DA5:K, 5DA5:L, 5DA5:M, 5DA5:N, 5DA5:O, 5DA5:P, 5DA5:Q, 5DA5:R, 5DA5:S, 5DA5:T, 5DA5:U, 5DA5:V, 5DA5:X, 5DA5:Z, 5FIR:B, 5FIR:D, 5FIR:F, 5FIR:H, 5L89:A, 5L89:B, 5L89:C, 5L89:D, 5L89:E, 5L89:F, 5L89:G, 5L89:H, 5L89:I, 5L89:J, 5L89:K, 5L89:L, 5L89:M, 5L89:N, 5L89:O, 5L89:P, 5L89:Q, 5L89:R, 5L89:S, 5L89:T, 5L89:U, 5L89:V, 5L89:W, 5L89:X, 5L89:Y, 5L89:Z, 5L8G:A, 5L8G:B, 5L8G:C, 5L8G:D, 5L8G:E, 5L8G:F, 5L8G:G, 5L8G:H, 5L8G:I, 5L8G:J, 5L8G:K, 5L8G:L, 5L8G:M, 5L8G:N, 5L8G:O, 5L8G:P, 5L8G:Q, 5L8G:R, 5L8G:S, 5L8G:T, 5L8G:U, 5L8G:V, 5L8G:W, 5L8G:X, 5L8G:Y, 5L8G:Z, 1VF6:A, 2CZS:A, 2OO9:A, d1ijwc_, d1vf6a_,
3 HHH Hr.0-Ha True 3TEQ:A, 4DH2:D, 4G2K:A, 4G2K:B, 4G2K:C, 4JF3:A, 4JF3:B, 4JGS:A, 4JGS:B, 4JGS:C, 4JGS:D, 4JGS:E, 4JGS:F, 4JGS:G, 4JGS:H, 4JGS:I, 4N21:A, 4N21:B, 4N21:C, 4N21:D, 4N21:F, 2EBO:A, 5HA6:A, 2eboA00,
3 HHH 0.Ha-0 True 3FXD:B, 3HLS:A, 3HLS:B, 3MTU:A, 3MTU:B, 3MTU:C, 3MTU:D, 3PH0:A, 3S6P:G, 4HP3:C, 4LN0:C, 4M70:R, 4UG3:C, 1LWU:A, 1M93:A, 2DB7:A, 2NR5:A, 2P58:A, d1iiea_, d2db7a1, d2nr5a1, 1iieA00,
3 HHH Ha.0-Hr False 2XTC:A, 2XTC:B, 2XZ2:A, 3M8A:B, 3M8A:C, 3M8A:E, 3M8A:H, 3M8A:J, 3M8A:L, 4IHF:J, 4NKJ:A,
3 HHH 0.Hr-0 False 3V9R:B, 3VIQ:B, 4F9K:A, 4GHJ:B, 4HDD:A, 4TSH:A, 4Z8E:A, 4Z8E:B, 4Z8E:C, 5LUT:C, 5LUT:E, 1NGM:B, 4YC5:A, 4ZN8:A, 5VC9:C, 5X42:B, d1kbha_, d1p94a_, 1kbhA00, 1ngmB00, 1ngmJ00, 1p94A00,
3 HHH Hr.Hr-Hr True 2XVC:A, 3C57:B, 3E7L:A, 3E7L:C, 3E7L:D, 3FGH:A, 3I71:A, 3SJM:A, 3SJM:B, 3U2B:C, 4A3N:A, 4D6K:A, 4D6K:B, 4D6K:C, 4D6K:D, 4D6K:E, 4L5E:A, 4QR9:A, 4QR9:B, 4S2Q:D, 4X86:B, 4Y60:C, 5DUK:A, 5DUK:B, 5TW1:E, 1GUU:A, 1GVD:A, 1L0O:C, 1UJ8:A, 2CJJ:A, 2HDZ:A, 2OOA:A, d1a6qa1, d1efub3, d1fexa_, d1g2ha_, d1gv2a2, d1gvda_, d1hlva2, d1iioa_, d1irza_, d1iufa2, d1j3da_, d1k78a2, d1l0oc_, d1l6ja1, d1lbua1, d1m1eb_, d1ofcx1, d1qzea1, d1rp3a1, d1rq6a_, d1smyf1, d1ttea1, d1u78a2, d1uj8a1, d1uxca_, d1uzca_, d1veka_, d1w0ua_, d1wgxa_, d1wiva_, d1x58a1, d1xb2b1, d1xc5a1, d2cfxa1, d2cg4a1, d2cjja1, d2cosa1, d2cp8a1, d2cqra1, d2crga1, d2crna1, d2cyya1, d2daha1, d2diia1, d2dkla1, d2doda1, d2hdza_, d2lefa_, d2ve8a_, d4a3na_, 1bbyA00, 1bbyA00, 1dp3A00, 1efuB01, 1fexA00, 1g2hA00, 1gt0D00, 1gvdA00, 1hsmA00, 1ifyA00, 1iioA00, 1irzA00, 1iv6A00, 1k78I00, 1l0oC00, 1l8yA00, 1rq6A00, 1uxdA00, 1uzcA00, 1w0tA00, 1w0uA00, 1wivA00, 2lefA00,
3 HHH Hr.Hr-0 True 2XUV:A, 2XUV:B, 2XUV:C, 2XUV:D, 2YFV:A, 2YFV:B, 3B0D:C, 3B0D:W, 3CX5:H, 3F75:P, 3MVD:B, 3MVD:F, 3NQJ:A, 3NQJ:B, 3R45:A, 3R45:B, 3V9R:D, 3X1T:B, 3X1T:F, 4CSR:B, 4E45:B, 4E45:D, 4E45:L, 4E45:N, 4H9N:B, 4YNH:A, 4YNH:B, 5AY8:B, 5AY8:F, 5BNX:A, 5BNX:B, 5DA5:Y, 5FIR:L, 5G49:B, 5JA4:A, 5JA4:B, 1A7W:A, 1B67:A, 1JFI:A, 1JKO:C, 1KU5:A, 1TAF:A, 1TAF:B, 2D3E:A, 2HUE:B, 2HUE:C, 2NXQ:A, 2YFW:B, 4ONS:B, d1b67a_, d1jfia_, d1n1jb_, d1tafa_, d1tafb_, d1zx3a1, d2huec_, d2np3a1, d2nxqa_, d3cx5h_, 1b67A00, 1b67A00, 1jfiA00, 1kx5B00, 1n1jB00, 1tafA00, 1tafB00, 1zx3A01, 2hueC00, 3cx5H00,
4 HHHH Ha.Hr.Ha-Hr.0-0 False d1nekd_,
4 HHHH Ha.Hp.Ha-Ha.Ha-Hp True 4ETR:A, 4ETR:B, 5GN8:B, 5MJ3:C, 1I4D:A, 1X79:A, 2HKV:A, 2IB0:A, d1i4da_, d1xdpa1, d2hkva1, d2ib0a1, 1i4dA00,
4 HHHH Hp.Ha.Hr-Ha.0-0 False 5E65:D,
4 HHHH Ha.Hr.0-0.Ha-Hp True 3FLV:A, 4J2C:A, 4J2C:C, 4ZWQ:B, 5H3G:A, 5H3I:A, 5H3I:B, 5H3I:C, 5H3I:D, 1HBK:A, 2CB8:A, d1hbka_, d2cb8a_, 1hbkA00,
4 HHHH 0.Ha.0-0.Hr-Hr False
4 HHHH Ha.0.Hr-Hr.0-0 False d1on2a2,
4 HHHH 0.Hr.Hr-0.Hr-0 True 3X39:B, 4A69:D, 4IEJ:A, 5AUR:A, 5AUR:C, 5AUR:E, 5AUR:G, d1t95a1, d3bz6a2,
4 HHHH Hr.Hr.Ha-0.0-0 True 3B0B:A, 3B0B:B, 3MVD:D, 3MVD:H, 3X1T:D, 3X1T:H, 4CAY:B, 4CSR:A, 4E45:A, 4E45:C, 4E45:F, 4E45:H, 4E45:K, 4E45:M, 4G92:B, 4IYL:A, 4NE3:A, 4WNN:B, 4WNN:D, 4WNN:F, 4WNN:H, 5AY8:D, 5AY8:H, 5G49:A, 2BYK:B, d1n1ja_, d1tzyb_, d2bykb1, 1kx3D00, 1kx5D00, 1n1jA00, 1tzyF00,
5 HHHHH Ha.Hp.Ha.Hr-Ha.Ha.0-Hp.0-0 True 3FVB:A, 3FVB:B, 4CMY:C, 4CMY:D, 4CMY:E, 4CMY:F, 4CMY:G, 4CMY:H, 4CMY:I, 4CMY:J, 4CMY:K, 4CMY:L, 4CMY:M, 4CMY:N, 4CMY:O, 4CMY:P, 4CMY:Q, 4CMY:R, 4CMY:S, 4CMY:T, 4CMY:U, 4CMY:W, 4CMY:X, 1JGC:A,
Protein In ProLegoDB with identical/similar Topology