Protein Detail

Protein Information

Domain Id	d3h31a_
DB_Source-Class	ASTRAL-1.75B, g.35.1.1
Molecule	u'High potential iron-sulfur protein'
Residues	74
Sequence
SSE Sequence^*(3)	`HEE`

^* Secondary structure Elements (SSE) from N to C terminal of the PDB chain. [SSE: H ("Alpha Helix"); E ("Strands")]

Protein Topology

Topology Information

Protein topology is represented by contact and orientation of secondary structure elements (SSEs). The figure on the left represents the contact map with information on type of orientation two SSEs share (color coded). The matrix can be represented in following string representation.

Contact String
cs [Click here to expand] `0.Ea-0`

Prefence of topology : True

[ Hover over the plot rectangles to know more about SSE-contact ]

Linear Topology Graph : d3h31a_

Protein Id: d3h31a_

Figure Detail - Blocks: Helix (rectangles), Strands (triangles); Colormap: Red (N-terminal),--(Green)-- Blue (C-Terminal). Spatial Connectivity by arc Lines [Hover over the image to know the SSE detail]

Topology Graph : d3h31a_

Protein Id: d3h31a_

Expand

Figure Detail - Blocks: Helix (circle), Strands (arrow); Colormap: Red (N-terminal), Blue (C-Terminal). Spatial Connectivity by dotted Lines [Hover over the image to know the SSE detail]

Protein In ProLegoDB with identical/similar Topology

Proteins with Identical Topology

[Same secondary structure composition, contact-pair and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
2Y8T	B	36	Rhoptry neck protein 2	View
2Y8T	E	36	Rhoptry neck protein 2	View
2ZJR	Z	58	50S ribosomal protein L32	View
3H31	A	74	High potential iron-sulfur protein	View
3O27	B	57	Putative uncharacterized protein	View
3SF4	D	45	Protein inscuteable homolog	View
3SF4	E	41	Protein inscuteable homolog	View
3SF4	F	46	Protein inscuteable homolog	View
4I6M	D	53	Regulator of Ty1 transposition protein 102	View
4XO1	A	55	Protein GnsA	View
4YIZ	B	39	Rhoptry neck protein 2, putative	View
4YIZ	D	39	Rhoptry neck protein 2, putative	View
4YIZ	F	39	Rhoptry neck protein 2, putative	View
5DM6	Z	57	50S ribosomal protein L32	View
5ITM	A	47	AbrB family transcriptional regulator	View
5ITM	B	47	AbrB family transcriptional regulator	View
5ITM	C	47	AbrB family transcriptional regulator	View
5ITM	D	47	AbrB family transcriptional regulator	View
5ITM	E	46	AbrB family transcriptional regulator	View
5ITM	F	46	AbrB family transcriptional regulator	View
1AVY	A	68	Fibritin	View
1HLQ	A	75	High-potential iron-sulfur protein	View
1ICF	I	65	HLA class II histocompatibility antigen gamma chain	View
1ISU	A	62	High-potential iron-sulfur protein	View
1PML	A	81	Tissue-type plasminogen activator	View
2ATC	B	152	Aspartate carbamoyltransferase regulatory chain	View
2DLB	A	69	SPBc2 prophage-derived uncharacterized protein YopT	View
2GGV	A	44	Genome polyprotein	View
d1hlqa_	--	75	u'High-potential iron-sulfur protein'	View
d1icfi_	--	65	u'HLA class II histocompatibility antigen gamma chain'	View
d1isua_	--	62	u'High-potential iron-sulfur protein'	View
d1ppji_	--	43	u'Cytochrome b-c1 complex subunit Rieske, mitochondrial'	View
d1rwsa_	--	68	u'Uncharacterized protein'	View
d1skza1	--	52	u'Antistasin'	View
d1tdha3	--	44	u'Endonuclease 8-like 1'	View
d1yfba1	--	51	u'Transition state regulatory protein AbrB'	View
d2dlba1	--	69	u'SPBc2 prophage-derived uncharacterized protein YopT'	View
d2i9aa2	--	83	u'Urokinase-type plasminogen activator'	View
d2qam01	--	56		View
d2zdra1	--	68	u'Spore coat polysaccharide biosynthesis protein spsE'	View
1avyA00	--	68	Fibritin	View
1avyB00	--	54	Fibritin	View
1avyA00	--	68	Fibritin	View
1avyB00	--	54	Fibritin	View
1hlqA00	--	75	High-potential iron-sulfur protein	View
1icfI00	--	65	HLA class II histocompatibility antigen gamma chain	View
1ppjI00	--	43	Cytochrome b-c1 complex subunit Rieske, mitochondrial	View
1rwsA00	--	68	Uncharacterized protein	View
2fd6A02	--	83	Urokinase-type plasminogen activator	View

Protein with similar Topology [same scaffold]

[Same secondary structure composition and contact-pair but of different orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology

Proteins with topologies of same secondary structure (H/E) component

[Topologies with same secondary structure composition with different contact-pairs and orientation]

PDB Id	Chain	Residues	Molecule	Detail Topology
2Y8T	B	36	Rhoptry neck protein 2	View
2Y8T	E	36	Rhoptry neck protein 2	View
2ZJR	Z	58	50S ribosomal protein L32	View
3E7R	L	40	Plectasin	View
3H31	A	74	High potential iron-sulfur protein	View
3K65	A	80	Prothrombin	View
3O27	B	57	Putative uncharacterized protein	View
3RDY	A	67	Proteinase inhibitor	View
3SF4	D	45	Protein inscuteable homolog	View
3SF4	E	41	Protein inscuteable homolog	View
3SF4	F	46	Protein inscuteable homolog	View
4GV5	A	42	Crotamine	View
4GV5	B	42	Crotamine	View
4GV5	C	42	Crotamine	View
4HR6	A	41	rRNA N-glycosidase	View
4I6M	D	53	Regulator of Ty1 transposition protein 102	View
4OWT	C	39	SOSS complex subunit C	View
4X8W	G	42	RE14437p	View
4XO1	A	55	Protein GnsA	View
4YIZ	B	39	Rhoptry neck protein 2, putative	View
4YIZ	D	39	Rhoptry neck protein 2, putative	View
4YIZ	F	39	Rhoptry neck protein 2, putative	View
5DM6	Z	57	50S ribosomal protein L32	View
5ITM	A	47	AbrB family transcriptional regulator	View
5ITM	B	47	AbrB family transcriptional regulator	View
5ITM	C	47	AbrB family transcriptional regulator	View
5ITM	D	47	AbrB family transcriptional regulator	View
5ITM	E	46	AbrB family transcriptional regulator	View
5ITM	F	46	AbrB family transcriptional regulator	View
5TVO	B	59	S-adenosylmethionine decarboxylase proenzyme	View
1AVY	A	68	Fibritin	View
1HLQ	A	75	High-potential iron-sulfur protein	View
1ICF	I	65	HLA class II histocompatibility antigen gamma chain	View
1ISU	A	62	High-potential iron-sulfur protein	View
1MHM	B	54	S-adenosylmethionine decarboxylase proenzyme	View
1PML	A	81	Tissue-type plasminogen activator	View
2ATC	B	152	Aspartate carbamoyltransferase regulatory chain	View
2DLB	A	69	SPBc2 prophage-derived uncharacterized protein YopT	View
2GGV	A	44	Genome polyprotein	View
2I61	A	62	Beta-insect depressant toxin LqhIT2	View

Topology view of query protein [ProLego results]

d3h31a_

Topology Information