ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
Advance Search
Residue >=
Residue <=
Molecule: [Protein molecule containing the word as query]
Source: [Source organism of protein ]
 
 help

Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d2d8xa1 g.39.1.3 32 see topology u'LIM and senescent cell antigen-like-containing domain protein 1' Homo sapiens
ASTRAL-1.75B d2dara1 g.39.1.3 32 see topology u'PDZ and LIM domain protein 5' Homo sapiens
ASTRAL-1.75B d1c6wa_ g.3.6.2 33 see topology u'Maurocalcin' Scorpio palmatus
ASTRAL-1.75B d1m36a_ g.37.1.2 33 see topology u'Histone acetyltransferase KAT6A' Homo sapiens
ASTRAL-1.75B d1rk8c_ b.72.3.1 33 see topology u'Partner of Y14 and mago' Drosophila melanogaster
ASTRAL-1.75B d2cu8a2 g.39.1.3 33 see topology u'Cysteine-rich protein 2' Homo sapiens
ASTRAL-1.75B d2dloa2 g.39.1.3 33 see topology u'Thyroid receptor-interacting protein 6' Homo sapiens
ASTRAL-1.75B d2gvia2 g.39.1.18 33 see topology u'Uncharacterized protein' Thermoplasma acidophilum
ASTRAL-1.75B d2ho2a1 b.72.1.1 33 see topology u'Amyloid beta A4 precursor protein-binding family B member 1' Homo sapiens
ASTRAL-1.75B d2jmfa1 b.72.1.1 33 see topology u'E3 ubiquitin-protein ligase Su(dx)' Drosophila melanogaster
ASTRAL-1.75B d1gl1i_ g.4.1.1 34 see topology u'Protease inhibitors' Locusta migratoria
ASTRAL-1.75B d1pina1 b.72.1.1 34 see topology u'Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1' Homo sapiens
ASTRAL-1.75B d1rutx2 g.39.1.3 34 see topology u'LIM domain-binding protein 1' Mus musculus
ASTRAL-1.75B d1x6aa2 g.39.1.3 34 see topology u'LIM domain kinase 2' Homo sapiens
ASTRAL-1.75B d2j4wd1 g.61.1.1 34 see topology u'Apical membrane antigen 1' Plasmodium vivax
CATH 3.5 1g3jD00 — 34 see topology Transcription factor 7-like 1-A Xenopus laevis
ASTRAL-1.75B d1b8ta1 g.39.1.3 35 see topology u'Cysteine and glycine-rich protein 1' Gallus gallus
ASTRAL-1.75B d1dx5i2 g.3.11.1 35 see topology u'Thrombomodulin' Homo sapiens
ASTRAL-1.75B d1pfva3 g.41.1.1 35 see topology u'Methionine--tRNA ligase' Escherichia coli
ASTRAL-1.75B d1sisa_ g.3.7.2 35 see topology u'Insectotoxin-I5A' Mesobuthus eupeus
Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins