ProLego Protein as lego blocks ...
 

Protein Domain Browser   [Search with followings]

Domain Id Database [Astral/CATH]
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Protein Domain List   [Click on contact String to explore]

Db Source domId Structure Class Residues Contact String Molecule Source
ASTRAL-1.75B d1c8na_ b.121.4.7 189 see topology u'Coat protein' unidentified tobacco necrosis virus
CATH 3.5 1c8nC00 2.60.120.20 219 see topology Coat protein unidentified tobacco necrosis virus
CATH 3.5 1c8nC00 2.60.120.20 219 see topology Coat protein unidentified tobacco necrosis virus
ASTRAL-1.75B d2q09a1 b.92.1.10 98 see topology u'Imidazolonepropionase' unidentified
ASTRAL-1.75B d3mkva1 b.92.1.9 103 see topology u'Amidohydrolase' unidentified
ASTRAL-1.75B d3mkva2 c.1.9.18 310 see topology u'Amidohydrolase' unidentified
CATH 3.5 1htmD00 3.90.20.10 123 see topology Hemagglutinin uncultured beta proteobacterium UMTRA-608
ASTRAL-1.75B d1tuha_ d.17.4.11 131 see topology u'Putative uncharacterized protein' uncultured bacterium
ASTRAL-1.75B d3fcda_ d.32.1.0 114 see topology u'Orf125EGC139' uncultured bacterium
CATH 3.5 1tuhA00 3.10.450.50 131 see topology Putative uncharacterized protein uncultured bacterium
ASTRAL-1.75B d2pq7a1 a.211.1.1 169 see topology u'Predicted HD superfamily hydrolase' uncultured Thermotogales bacterium
CATH 3.5 2pq7A00 1.10.3210.10 169 see topology Predicted HD superfamily hydrolase uncultured Thermotogales bacterium
ASTRAL-1.75B d2ayha_ b.29.1.2 214 see topology u'Beta-glucanase' hybrid
CATH 3.5 2ayhA00 2.60.120.200 214 see topology Beta-glucanase hybrid
ASTRAL-1.75B d3mjza_ d.80.1.0 131 see topology u'FG41 Malonate Semialdehyde Decarboxylase' coryneform bacterium
CATH 3.5 1akpA00 2.60.40.230 114 see topology Apokedarcidin actinomycete ATCC 53650
CATH 3.5 1akpA00 2.60.40.230 114 see topology Apokedarcidin actinomycete ATCC 53650
ASTRAL-1.75B d3tpaa_ c.94.1.0 507 see topology u'Heme-binding protein A' [Haemophilus] parasuis
ASTRAL-1.75B d1sr4a_ b.42.2.1 167 see topology u'Cytolethal distending toxin subunit A' [Haemophilus] ducreyi
ASTRAL-1.75B d1sr4c_ b.42.2.1 154 see topology u'Cytolethal distending toxin protein C' [Haemophilus] ducreyi
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Table Description [Click here to expand]

Above table lists all the available domains in the ProLego database, from CATH and SCOP database. Each domain (row in the table), has the link to corresponding domain structure as well as the Topology link for detail analysis of proLeg-topologies. Table column heads can be read as following,

  • Db Source:  CATH (v. CATH_4.1) or SCOP (ASTRAL_30)
  • domId:  Domain Identity as provided by respective databases
  • Structure Class: Structure Classification string as provided by individual database.
  • Residues:  Number of amino acids (or residues) in the domain.
  • Contact String:  Link to explore the prolego topology present in that domain
  • Source:  Biological lsource of the proteins